RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 CEP104O60308 925 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 MARCH6O60337 910 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 FLOT1O75955 427 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 PAEPP09466 180 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 HPDP32754 393 aaPredicted RBP13.09□□□□□ -0.31
CPEB4-207ENST00000519835 SMTNP53814 917 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 C6orf89Q6UWU4 347 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 VPS36Q86VN1 386 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 NELFCDQ8IXH7 590 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 LRRC57Q8N9N7 239 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 MARCH10Q8NA82 808 aaPredicted RBP13.09□□□□□ -0.31
CPEB4-207ENST00000519835 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 LMBR1Q8WVP7 490 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 SLC12A6Q9UHW9 1150 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 NFS1Q9Y697 457 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 A0A0A6YYK5 440 aaPredicted RBP13.09□□□□□ -0.31
CPEB4-207ENST00000519835 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
CPEB4-207ENST00000519835 PRKCIP41743 596 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 CDR1P51861 262 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 SEC24CP53992 1094 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 GSCP56915 257 aaPredicted RBP13.09□□□□□ -0.31
CPEB4-207ENST00000519835 RNASE9P60153 205 aaKnown RBP13.09□□□□□ -0.31
CPEB4-207ENST00000519835 ZNF844Q08AG5 666 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 KCNH2Q12809 1159 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 ADAM9Q13443 819 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 ECM1Q16610 540 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 CCDC121Q6ZUS5 278 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 RPAINQ86UA6 219 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 SYCE1Q8N0S2 351 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 CUL5Q93034 780 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 COA7Q96BR5 231 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 EMILIN3Q9NT22 766 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 INTUQ9ULD6 942 aa13.09□□□□□ -0.31
CPEB4-207ENST00000519835 FRMPD2Q68DX3 1309 aaPredicted RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 ZNF335Q9H4Z2 1342 aaPredicted RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 GPR75-ASB3A0A0A6YYF3 556 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 FRMD3A2A2Y4 597 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 GMNCA6NCL1 334 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 CLK2P49760 499 aaKnown RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 PPP2R2AP63151 447 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 PTK2Q05397 1052 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 UAP1Q16222 522 aaPredicted RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 HERC4Q5GLZ8 1057 aaPredicted RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 SPDYCQ5MJ68 293 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 FRMD5Q7Z6J6 570 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 GPBP1Q86WP2 473 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 CCDC13Q8IYE1 715 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 RASGEF1CQ8N431 466 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 SCFD1Q8WVM8 642 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 P3H4Q92791 437 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 HAS1Q92839 578 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 CENPHQ9H3R5 247 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 ANKIB1Q9P2G1 1089 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 NAGPAQ9UK23 515 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 FBXL5Q9UKA1 691 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 PCDHA12Q9UN75 941 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 SART1O43290 800 aaKnown RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 PLA2G4BP0C869 781 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 SNHG28P0DPA3 235 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 IFT88Q13099 833 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 TRADDQ15628 312 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 ENOX2Q16206 610 aaKnown RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 TPTE2Q6XPS3 522 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 C15orf52Q6ZUT6 534 aaKnown RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 ZNF571Q7Z3V5 609 aaPredicted RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 IRF2BP2Q7Z5L9 587 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 FGFBP2Q9BYJ0 223 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 PPANQ9NQ55 473 aaKnown RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
CPEB4-207ENST00000519835 SUCLA2Q9P2R7 463 aaPredicted RBP13.08□□□□□ -0.32
CPEB4-207ENST00000519835 PNMA6FA0A0J9YX94 578 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 C5orf60A6NFR6 353 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 CHUKO15111 745 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 AFPP02771 609 aaKnown RBP13.07□□□□□ -0.32
CPEB4-207ENST00000519835 UCHL3P15374 230 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 NR2F2P24468 414 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 MAP2K2P36507 400 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 MRPL12P52815 198 aaKnown RBP13.07□□□□□ -0.32
CPEB4-207ENST00000519835 NPEPPSP55786 919 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 ALKBH5Q6P6C2 394 aaKnown RBP13.07□□□□□ -0.32
CPEB4-207ENST00000519835 PEX26Q7Z412 305 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 SLF2Q8IX21 1173 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 UBLCP1Q8WVY7 318 aaPredicted RBP13.07□□□□□ -0.32
CPEB4-207ENST00000519835 POLD4Q9HCU8 107 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 TBC1D7Q9P0N9 293 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 ARMCX3Q9UH62 379 aaPredicted RBP13.07□□□□□ -0.32
CPEB4-207ENST00000519835 SWAP70Q9UH65 585 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 NENFQ9UMX5 172 aa13.07□□□□□ -0.32
CPEB4-207ENST00000519835 AHDC1Q5TGY3 1603 aaPredicted RBP13.07□□□□□ -0.32
CPEB4-207ENST00000519835 KRIT1O00522 736 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 KRT18P05783 430 aaKnown RBP13.06□□□□□ -0.32
CPEB4-207ENST00000519835 ZBTB48P10074 688 aaPredicted RBP13.06□□□□□ -0.32
CPEB4-207ENST00000519835 CYP11B2P19099 503 aa13.06□□□□□ -0.32
CPEB4-207ENST00000519835 GRIK5Q16478 980 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms