RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CEP55Q53EZ4 464 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 ZNF713Q8N859 430 aaPredicted RBP14.22□□□□□ -0.13
CSMD1-205ENST00000519623 APBB2Q92870 758 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 UHRF1Q96T88 793 aaPredicted RBP14.22□□□□□ -0.13
CSMD1-205ENST00000519623 C17orf80Q9BSJ5 609 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 ANO3Q9BYT9 981 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 IFIH1Q9BYX4 1025 aaKnown RBP14.22□□□□□ -0.13
CSMD1-205ENST00000519623 JPH1Q9HDC5 661 aaPredicted RBP14.22□□□□□ -0.13
CSMD1-205ENST00000519623 TMEM260Q9NX78 707 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 SLC9A2Q9UBY0 812 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 COG5Q9UP83 839 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 COL4A4P53420 1690 aaPredicted RBP14.22□□□□□ -0.13
CSMD1-205ENST00000519623 ADAMTS3O15072 1205 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 UPP2O95045 317 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 ATG7O95352 703 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 HSPA4P34932 840 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 SREBF1P36956 1147 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 ACTR2P61160 394 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 APOBRQ0VD83 1088 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 LPIN1Q14693 890 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 FBXL16Q8N461 479 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 DNAJB3Q8WWF6 145 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 HLA-CQ95604 372 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 ZBTB10Q96DT7 871 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 NECAB3Q96P71 396 aaPredicted RBP14.21□□□□□ -0.13
CSMD1-205ENST00000519623 GLT8D2Q9H1C3 349 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 AGO4Q9HCK5 861 aaKnown RBP14.21□□□□□ -0.13
CSMD1-205ENST00000519623 TUBE1Q9UJT0 475 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 SNX14Q9Y5W7 946 aa14.21□□□□□ -0.13
CSMD1-205ENST00000519623 RRN3P2A6NIE6 340 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 ENPP3O14638 875 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 GHRP10912 638 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 AP3B2Q13367 1082 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 PLCB4Q15147 1175 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 PKN1Q16512 942 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 PFKFB3Q16875 520 aaPredicted RBP14.2□□□□□ -0.14
CSMD1-205ENST00000519623 FBXO47Q5MNV8 452 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 Q6ZUG5 572 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 PLPPR4Q7Z2D5 763 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 RSPH3Q86UC2 560 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 IL27Q8NEV9 243 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 FBXO22Q8NEZ5 403 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 CRYGNQ8WXF5 182 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 JAKMIP1Q96N16 626 aaKnown RBP14.2□□□□□ -0.14
CSMD1-205ENST00000519623 SDF4Q9BRK5 362 aa14.2□□□□□ -0.14
CSMD1-205ENST00000519623 IGKV6D-21A0A0A0MT36 114 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 CCDC196A0A1B0GTZ2 297 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 FAM86B1E9PN63 330 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 DHX15O43143 795 aaKnown RBP14.19□□□□□ -0.14
CSMD1-205ENST00000519623 CCNE2O96020 404 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 CYP3A4P08684 503 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 FAM86B2P0C5J1 330 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 SCG2P13521 617 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 METAP2P50579 478 aaKnown RBP eCLIP14.19□□□□□ -0.14
CSMD1-205ENST00000519623 STAT5BP51692 787 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 IGBP1P78318 339 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 FGD1P98174 961 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 EPC2Q52LR7 807 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 JAKMIP3Q5VZ66 844 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 NIPA1Q7RTP0 329 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 BRF1Q92994 677 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 YME1L1Q96TA2 773 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 AGXT2Q9BYV1 514 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 ZMYND12Q9H0C1 365 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 AZI2Q9H6S1 392 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 NAP1L2Q9ULW6 460 aaPredicted RBP14.19□□□□□ -0.14
CSMD1-205ENST00000519623 PCDHA2Q9Y5H9 948 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 CDY2AQ9Y6F7 541 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 MYO7AQ13402 2215 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 TTC3P53804 2025 aa14.19□□□□□ -0.14
CSMD1-205ENST00000519623 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.18□□□□□ -0.14
CSMD1-205ENST00000519623 ESYT2A0FGR8 921 aa14.18□□□□□ -0.14
CSMD1-205ENST00000519623 PRPF3O43395 683 aaKnown RBP14.18□□□□□ -0.14
CSMD1-205ENST00000519623 ZNF76P36508 570 aa14.18□□□□□ -0.14
CSMD1-205ENST00000519623 MRPS6P82932 125 aaKnown RBP14.18□□□□□ -0.14
CSMD1-205ENST00000519623 NTRK3Q16288 839 aa14.18□□□□□ -0.14
CSMD1-205ENST00000519623 BLOC1S2Q6QNY1 142 aa14.18□□□□□ -0.14
CSMD1-205ENST00000519623 ABHD15Q6UXT9 468 aa14.18□□□□□ -0.14
CSMD1-205ENST00000519623 RTN4RL1Q86UN2 441 aaPredicted RBP14.18□□□□□ -0.14
CSMD1-205ENST00000519623 TMEM192Q8IY95 271 aa14.18□□□□□ -0.14
CSMD1-205ENST00000519623 TRAPPC12Q8WVT3 735 aa14.18□□□□□ -0.14
CSMD1-205ENST00000519623 IL17RAQ96F46 866 aa14.18□□□□□ -0.14
CSMD1-205ENST00000519623 SAMD11Q96NU1 681 aa14.18□□□□□ -0.14
CSMD1-205ENST00000519623 AGO3Q9H9G7 860 aaKnown RBP14.18□□□□□ -0.14
CSMD1-205ENST00000519623 LOXHD1Q8IVV2 1947 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 IGLV3-22A0A075B6J6 115 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 POTEB3A0JP26 581 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 H3BNC9 293 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 LINC00271P0C7V0 271 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 RPS6KB1P23443 525 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 IER5Q5VY09 327 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 POTEBQ6S5H4 581 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 TSHZ1Q6ZSZ6 1077 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 PLA2G4DQ86XP0 818 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 TNPO1Q92973 898 aaKnown RBP14.17□□□□□ -0.14
CSMD1-205ENST00000519623 MRPL38Q96DV4 380 aaKnown RBP14.17□□□□□ -0.14
CSMD1-205ENST00000519623 CCDC136Q96JN2 1154 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 FAM49AQ9H0Q0 323 aaPredicted RBP14.17□□□□□ -0.14
CSMD1-205ENST00000519623 TRPC6Q9Y210 931 aa14.17□□□□□ -0.14
CSMD1-205ENST00000519623 SQORQ9Y6N5 450 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms