RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 SEC23AQ15436 765 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 TCEA2Q15560 299 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 RGL3Q3MIN7 710 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 TM4SF20Q53R12 229 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 ZCCHC8Q6NZY4 707 aaKnown RBP5.5□□□□□ -1.53
SKP1-205ENST00000519054 TRMT10BQ6PF06 316 aaKnown RBP5.5□□□□□ -1.53
SKP1-205ENST00000519054 DDX53Q86TM3 631 aaKnown RBP5.5□□□□□ -1.53
SKP1-205ENST00000519054 NOSTRINQ8IVI9 506 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 C2orf69Q8N8R5 385 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 TXNDC5Q8NBS9 432 aaKnown RBP5.5□□□□□ -1.53
SKP1-205ENST00000519054 ZCCHC14Q8WYQ9 949 aaKnown RBP5.5□□□□□ -1.53
SKP1-205ENST00000519054 C20orf173Q96LM9 149 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 L2HGDHQ9H9P8 463 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 ARHGAP20Q9P2F6 1191 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 ARHGAP28Q9P2N2 729 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 ZFP69BQ9UJL9 534 aa5.5□□□□□ -1.53
SKP1-205ENST00000519054 SLC12A8A0AV02 714 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 B4E1Z4 1266 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 M0R2C6 588 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 NOBOXO60393 691 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 RFPL3O75679 317 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 FBXO21O94952 628 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 NPTXRO95502 500 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 CYP1A1P04798 512 aaPredicted RBP5.49□□□□□ -1.53
SKP1-205ENST00000519054 CTSWP56202 376 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 FAM26FQ5R3K3 315 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 C16orf86Q6ZW13 317 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 SYNPOQ8N3V7 929 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 STPG3Q8N7X2 389 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 IGDCC4Q8TDY8 1250 aa5.49□□□□□ -1.53
SKP1-205ENST00000519054 DDX1Q92499 740 aaKnown RBP5.49□□□□□ -1.53
SKP1-205ENST00000519054 TACO1Q9BSH4 297 aaKnown RBP5.49□□□□□ -1.53
SKP1-205ENST00000519054 KRT37O76014 449 aa5.48□□□□□ -1.53
SKP1-205ENST00000519054 JMJD7P0C870 316 aa5.48□□□□□ -1.53
SKP1-205ENST00000519054 PIK3R6Q5UE93 754 aa5.48□□□□□ -1.53
SKP1-205ENST00000519054 PKN3Q6P5Z2 889 aa5.48□□□□□ -1.53
SKP1-205ENST00000519054 LILRA6Q6PI73 481 aa5.48□□□□□ -1.53
SKP1-205ENST00000519054 FRMD5Q7Z6J6 570 aa5.48□□□□□ -1.53
SKP1-205ENST00000519054 NOP9Q86U38 636 aaKnown RBP5.48□□□□□ -1.53
SKP1-205ENST00000519054 FTSJ1Q9UET6 329 aa5.48□□□□□ -1.53
SKP1-205ENST00000519054 RAPGEFL1Q9UHV5 662 aa5.48□□□□□ -1.53
SKP1-205ENST00000519054 MROH6A6NGR9 719 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 HIP1RO75146 1068 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 IL18BPO95998 194 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 MMEP08473 750 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 COL6A1P12109 1028 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 MC4RP32245 332 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 FLT3P36888 993 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 RANGAP1P46060 587 aaPredicted RBP5.47□□□□□ -1.53
SKP1-205ENST00000519054 IRF9Q00978 393 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 NFIXQ14938 502 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 TMEM132BQ14DG7 1078 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 SMAD2Q15796 467 aaKnown RBP5.47□□□□□ -1.53
SKP1-205ENST00000519054 FERMT3Q86UX7 667 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 LCORQ96JN0 433 aaPredicted RBP5.47□□□□□ -1.53
SKP1-205ENST00000519054 YTHDC1Q96MU7 727 aaKnown RBP5.47□□□□□ -1.53
SKP1-205ENST00000519054 TMEM168Q9H0V1 697 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 KCNH7Q9NS40 1196 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 KCND1Q9NSA2 647 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 RTEL1Q9NZ71 1219 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 MAGEC2Q9UBF1 373 aaPredicted RBP5.47□□□□□ -1.53
SKP1-205ENST00000519054 B3GALT1Q9Y5Z6 326 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 DUSP10Q9Y6W6 482 aa5.47□□□□□ -1.53
SKP1-205ENST00000519054 KNG1P01042 644 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 ZBTB48P10074 688 aaPredicted RBP5.46□□□□□ -1.54
SKP1-205ENST00000519054 PTGS1P23219 599 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 AOAHP28039 575 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 CNR2P34972 360 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 MECP2P51608 486 aaKnown RBP5.46□□□□□ -1.54
SKP1-205ENST00000519054 HERVK_113P62684 666 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 KIAA2012Q0VF49 1180 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 CFAP100Q494V2 611 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 CDCA2Q69YH5 1023 aaPredicted RBP5.46□□□□□ -1.54
SKP1-205ENST00000519054 UBE2R2Q712K3 238 aaPredicted RBP5.46□□□□□ -1.54
SKP1-205ENST00000519054 CHST14Q8NCH0 376 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 NUDT10Q8NFP7 164 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 DLG3Q92796 817 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 NUDT11Q96G61 164 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 WNK4Q96J92 1243 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 BOCQ9BWV1 1114 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 CABP5Q9NP86 173 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 INCENPQ9NQS7 918 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 UCKL1Q9NWZ5 548 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 BTBD7Q9P203 1132 aa5.46□□□□□ -1.54
SKP1-205ENST00000519054 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 PTPDC1A2A3K4 754 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 RASSF10A6NK89 507 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 TRAF5O00463 557 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 FOXP2O15409 715 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 PRICKLE3O43900 615 aaPredicted RBP5.45□□□□□ -1.54
SKP1-205ENST00000519054 ARHGAP44Q17R89 818 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 UBXN11Q5T124 520 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 CNNM4Q6P4Q7 775 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 OTOP1Q7RTM1 612 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 FAM124AQ86V42 546 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 DHX37Q8IY37 1157 aaKnown RBP5.45□□□□□ -1.54
SKP1-205ENST00000519054 NIM1KQ8IY84 436 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 HIPK4Q8NE63 616 aa5.45□□□□□ -1.54
SKP1-205ENST00000519054 ASB15Q8WXK1 588 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms