RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 POTEFA5A3E0 1075 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 ZBTB5O15062 677 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 POTEIP0CG38 1075 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 ATP2B4P23634 1241 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 ECHS1P30084 290 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 ERVK-9P63128 1117 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 FAM182BQ5T319 152 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 PRR5LQ6MZQ0 368 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 POTEGQ6S5H5 508 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 POTEEQ6S8J3 1075 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 PROCA1Q8NCQ7 364 aaPredicted RBP18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 RPGRQ92834 1020 aaKnown RBP18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 KCNMB3Q9NPA1 279 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 ADAMTSL1Q8N6G6 1762 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 ERLIN2O94905 339 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 LSP1P33241 339 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 SF3B2Q13435 895 aaKnown RBP18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 SLF2Q8IX21 1173 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 RBM46Q8TBY0 533 aaKnown RBP18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 WHAMMQ8TF30 809 aa18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 GREB1LQ9C091 1923 aaPredicted RBP18.16■□□□□ 0.5
PCDHGA11-202ENST00000518882 KDM4FA0A1W2PPD8 638 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 BTNL10A8MVZ5 291 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 CETN3O15182 167 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 KIF4AO95239 1232 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 UCHL3P15374 230 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 NR1D1P20393 614 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 HOXD13P35453 343 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 PSMC6P62333 389 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 RPS6KA1Q15418 735 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 EDRF1Q3B7T1 1238 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 ICE2Q659A1 982 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 LRRC57Q8N9N7 239 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 PLAAQ9Y263 795 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 F8W031 263 aaPredicted RBP18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 CLSTN1O94985 981 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 KRT18P05783 430 aaKnown RBP18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 HSPA9P38646 679 aaKnown RBP18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 TNNC1P63316 161 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 EMC10Q5UCC4 262 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 ATP6V1G3Q96LB4 118 aa18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 DHX36Q9H2U1 1008 aaKnown RBP18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 TAF1DQ9H5J8 278 aaPredicted RBP18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 AJAP1Q9UKB5 411 aaPredicted RBP18.15■□□□□ 0.5
PCDHGA11-202ENST00000518882 SHMT1P34896 483 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 USP11P51784 963 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 DDX42Q86XP3 938 aaKnown RBP eCLIP18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 SCFD2Q8WU76 684 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 TAF4BQ92750 862 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 AP1M1Q9BXS5 423 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 NAGPAQ9UK23 515 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 A6NNZ2 444 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 PON1P27169 355 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 GTF2IP78347 998 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 TUBB8Q3ZCM7 444 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 PPP4R3CPQ6ZMV5 832 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 CATSPER3Q86XQ3 398 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 TBC1D16Q8TBP0 767 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 TBC1D22AQ8WUA7 517 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 P2RX7Q99572 595 aaKnown RBP18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 ISCUQ9H1K1 167 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 EPN3Q9H201 632 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 BCAS3Q9H6U6 928 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 SERPINB13Q9UIV8 391 aa18.14■□□□□ 0.49
PCDHGA11-202ENST00000518882 PITPNM2Q9BZ72 1349 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 MEIS1O00470 390 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 CES2O00748 559 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 CEP104O60308 925 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 SPIRE1Q08AE8 756 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 ITGB3BPQ13352 177 aaPredicted RBP18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 GIT2Q14161 759 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 HLTFQ14527 1009 aaKnown RBP eCLIP18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 CRY2Q49AN0 593 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 CEP85LQ5SZL2 805 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 TRAPPC3LQ5T215 181 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 MAATS1Q7Z4T9 603 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 SPAG5Q96R06 1193 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 NEUROG2Q9H2A3 272 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 PLCB1Q9NQ66 1216 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 SWAP70Q9UH65 585 aa18.13■□□□□ 0.49
PCDHGA11-202ENST00000518882 SEC24CP53992 1094 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 UAP1Q16222 522 aaPredicted RBP18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 NAA35Q5VZE5 725 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 FBXW10Q5XX13 1052 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 ALKBH5Q6P6C2 394 aaKnown RBP18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 SFR1Q86XK3 245 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 OR2W6PQ8NHA6 318 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 ARMCX3Q9UH62 379 aaPredicted RBP18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 TRAF3IP3Q9Y228 551 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 MPHOSPH10O00566 681 aaKnown RBP18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 PPP1R37O75864 691 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 AKAP3O75969 853 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 AFPP02771 609 aaKnown RBP18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 INPP5BP32019 993 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 HSD17B3P37058 310 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 PABPC4Q13310 644 aaKnown RBP eCLIP18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 PTGISQ16647 500 aa18.12■□□□□ 0.49
PCDHGA11-202ENST00000518882 EXOC3L4Q17RC7 722 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms