RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 LOC730098B7Z3J9 87 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 EFSO43281 561 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 MSCO60682 206 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 KINO60870 393 aaKnown RBP4.33□□□□□ -1.72
CPNE3-204ENST00000517862 FBXO24O75426 580 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 STK10O94804 968 aaKnown RBP4.33□□□□□ -1.72
CPNE3-204ENST00000517862 NEFLP07196 543 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 ZKSCAN1P17029 563 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-204ENST00000517862 CNGA1P29973 690 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 ICAM3P32942 547 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 RAP1GAPP47736 663 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 ARSDP51689 593 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 FAAP100Q0VG06 881 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 SLC39A6Q13433 755 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 IL31Q6EBC2 164 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 SPRED2Q7Z698 418 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 SMCR8Q8TEV9 937 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-204ENST00000517862 NUDT8Q8WV74 236 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 HNRNPLLQ8WVV9 542 aaKnown RBP4.33□□□□□ -1.72
CPNE3-204ENST00000517862 FRMD6Q96NE9 622 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 BCO2Q9BYV7 579 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 ZC3H12CQ9C0D7 883 aaKnown RBP4.33□□□□□ -1.72
CPNE3-204ENST00000517862 CHRDQ9H2X0 955 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 IL23AQ9NPF7 189 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 LATS2Q9NRM7 1088 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 CLDND1Q9NY35 253 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 FAM13BQ9NYF5 915 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 CNTN3Q9P232 1028 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 FAM8A1Q9UBU6 413 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 POLLQ9UGP5 575 aa4.33□□□□□ -1.72
CPNE3-204ENST00000517862 TMA7Q9Y2S6 64 aaKnown RBP4.33□□□□□ -1.72
CPNE3-204ENST00000517862 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.33□□□□□ -1.72
CPNE3-204ENST00000517862 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-204ENST00000517862 ITPR2Q14571 2701 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 ZNF804BA4D1E1 1349 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 CACNA1DQ01668 2161 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 TGM1P22735 817 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 INPP5BP32019 993 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 AFF1P51825 1210 aaKnown RBP4.32□□□□□ -1.72
CPNE3-204ENST00000517862 SAMD5Q5TGI4 173 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 RNF43Q68DV7 783 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 BTLAQ7Z6A9 289 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 NOP9Q86U38 636 aaKnown RBP4.32□□□□□ -1.72
CPNE3-204ENST00000517862 VSIG10LQ86VR7 867 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 JAZF1Q86VZ6 243 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 PROSER1Q86XN7 944 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 ANKRD13CQ8N6S4 541 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 C1orf127Q8N9H9 656 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.32□□□□□ -1.72
CPNE3-204ENST00000517862 RIN2Q8WYP3 895 aaPredicted RBP4.32□□□□□ -1.72
CPNE3-204ENST00000517862 GPRASP2Q96D09 838 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 LIN37Q96GY3 246 aaPredicted RBP4.32□□□□□ -1.72
CPNE3-204ENST00000517862 COG3Q96JB2 828 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 FAM84AQ96KN4 292 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 OSBPL2Q9H1P3 480 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 PARD6AQ9NPB6 346 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 RXFP3Q9NSD7 469 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 ANKIB1Q9P2G1 1089 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 KANSL3Q9P2N6 904 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 CCDC39Q9UFE4 941 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.32□□□□□ -1.72
CPNE3-204ENST00000517862 TTF2Q9UNY4 1162 aaKnown RBP4.32□□□□□ -1.72
CPNE3-204ENST00000517862 SNCAIPQ9Y6H5 919 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 ECM29Q5VYK3 1845 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 MTORP42345 2549 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 F8P00451 2351 aa4.32□□□□□ -1.72
CPNE3-204ENST00000517862 MYO10Q9HD67 2058 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 ATRQ13535 2644 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 RALGAPA1Q6GYQ0 2036 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 EVC2Q86UK5 1308 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 CENPJQ9HC77 1338 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-204ENST00000517862 TLDC2A0PJX2 215 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 PI15O43692 258 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 ALX3O95076 343 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 CYP2E1P05181 493 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-204ENST00000517862 RPLP1P05386 114 aaKnown RBP4.31□□□□□ -1.72
CPNE3-204ENST00000517862 INHBBP09529 407 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 XRCC5P13010 732 aaKnown RBP4.31□□□□□ -1.72
CPNE3-204ENST00000517862 ATF4P18848 351 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-204ENST00000517862 ELAVL4P26378 380 aaKnown RBP4.31□□□□□ -1.72
CPNE3-204ENST00000517862 SMAD4Q13485 552 aaKnown RBP4.31□□□□□ -1.72
CPNE3-204ENST00000517862 GRM2Q14416 872 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 CBX2Q14781 532 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-204ENST00000517862 IER5Q5VY09 327 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 SDE2Q6IQ49 451 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 ZNF530Q6P9A1 599 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-204ENST00000517862 C1QL4Q86Z23 238 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 CILP2Q8IUL8 1156 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 AGBL5Q8NDL9 886 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 FLCNQ8NFG4 579 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 CEP63Q96MT8 703 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 SUGCTQ9HAC7 445 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 ANKMY1Q9P2S6 941 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 MTUS1Q9ULD2 1270 aa4.31□□□□□ -1.72
CPNE3-204ENST00000517862 ACACAQ13085 2346 aa4.3□□□□□ -1.72
CPNE3-204ENST00000517862 EDC4Q6P2E9 1401 aaKnown RBP4.3□□□□□ -1.72
CPNE3-204ENST00000517862 CABIN1Q9Y6J0 2220 aa4.3□□□□□ -1.72
CPNE3-204ENST00000517862 MINDY4BA8MYZ0 360 aa4.3□□□□□ -1.72
CPNE3-204ENST00000517862 XYLBO75191 536 aa4.3□□□□□ -1.72
CPNE3-204ENST00000517862 A1BGP04217 495 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms