RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 NEK9Q8TD19 979 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 IQCDQ96DY2 449 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 RNF146Q9NTX7 359 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 AGPAT5Q9NUQ2 364 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 PKD2L1Q9P0L9 805 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 WRAP73Q9P2S5 460 aaPredicted RBP29.36■■■□□ 2.29
COL13A1-210ENST00000517713 RIPK3Q9Y572 518 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 ZBTB39O15060 712 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 DDNO94850 711 aaPredicted RBP29.35■■■□□ 2.29
COL13A1-210ENST00000517713 GAP43P17677 238 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 COG2Q14746 738 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 EDRF1Q3B7T1 1238 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 ZC3H3Q8IXZ2 948 aaKnown RBP29.35■■■□□ 2.29
COL13A1-210ENST00000517713 FHDC1Q9C0D6 1143 aaPredicted RBP29.35■■■□□ 2.29
COL13A1-210ENST00000517713 TMOD4Q9NZQ9 345 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 ADAMTS5Q9UNA0 930 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 A0A1W2PQJ5 194 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 OAZ1P54368 228 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 ZBED6P86452 979 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 MTMR1Q13613 665 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 MIER3Q7Z3K6 550 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 RMDN3Q96TC7 470 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 CHP1Q99653 195 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 LXNQ9BS40 222 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 RLFQ13129 1914 aa29.35■■■□□ 2.29
COL13A1-210ENST00000517713 DHX15O43143 795 aaKnown RBP29.34■■■□□ 2.29
COL13A1-210ENST00000517713 PRKG1Q13976 671 aa29.34■■■□□ 2.29
COL13A1-210ENST00000517713 KNOP1Q1ED39 458 aaKnown RBP29.34■■■□□ 2.29
COL13A1-210ENST00000517713 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.34■■■□□ 2.29
COL13A1-210ENST00000517713 PXMP2Q9NR77 195 aa29.34■■■□□ 2.29
COL13A1-210ENST00000517713 SIK3Q9Y2K2 1263 aa29.34■■■□□ 2.29
COL13A1-210ENST00000517713 AFG3L2Q9Y4W6 797 aa29.34■■■□□ 2.29
COL13A1-210ENST00000517713 MYBP10242 640 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 CATSPERGQ6ZRH7 1159 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 BANK1Q8NDB2 785 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 POLD4Q9HCU8 107 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 USP2O75604 605 aaPredicted RBP29.33■■■□□ 2.29
COL13A1-210ENST00000517713 FAM13AO94988 1023 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 MYCLP12524 364 aaPredicted RBP29.33■■■□□ 2.29
COL13A1-210ENST00000517713 GNG11P61952 73 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 ITGB3BPQ13352 177 aaPredicted RBP29.33■■■□□ 2.29
COL13A1-210ENST00000517713 ADAM9Q13443 819 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 ARHGEF16Q5VV41 709 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 SNRNP48Q6IEG0 339 aaKnown RBP29.33■■■□□ 2.29
COL13A1-210ENST00000517713 ZNF397Q8NF99 534 aaPredicted RBP29.33■■■□□ 2.29
COL13A1-210ENST00000517713 PDCD2LQ9BRP1 358 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 L2HGDHQ9H9P8 463 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 OLFML3Q9NRN5 406 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 TRAF3IP3Q9Y228 551 aa29.33■■■□□ 2.29
COL13A1-210ENST00000517713 COL11A1P12107 1806 aaPredicted RBP29.33■■■□□ 2.29
COL13A1-210ENST00000517713 ERCC3P19447 782 aa29.32■■■□□ 2.28
COL13A1-210ENST00000517713 MARSP56192 900 aaKnown RBP29.32■■■□□ 2.28
COL13A1-210ENST00000517713 BMT2Q1RMZ1 405 aa29.32■■■□□ 2.28
COL13A1-210ENST00000517713 WDR59Q6PJI9 974 aa29.32■■■□□ 2.28
COL13A1-210ENST00000517713 ACRBPQ8NEB7 543 aa29.32■■■□□ 2.28
COL13A1-210ENST00000517713 ADARB2Q9NS39 739 aaKnown RBP29.32■■■□□ 2.28
COL13A1-210ENST00000517713 KCND2Q9NZV8 630 aa29.32■■■□□ 2.28
COL13A1-210ENST00000517713 PRPF6O94906 941 aaKnown RBP29.32■■■□□ 2.28
COL13A1-210ENST00000517713 HOXD13P35453 343 aa29.32■■■□□ 2.28
COL13A1-210ENST00000517713 RBM10P98175 930 aaKnown RBP29.32■■■□□ 2.28
COL13A1-210ENST00000517713 BAATQ14032 418 aaPredicted RBP29.32■■■□□ 2.28
COL13A1-210ENST00000517713 MEA1Q16626 185 aa29.32■■■□□ 2.28
COL13A1-210ENST00000517713 BCAS3Q9H6U6 928 aa29.32■■■□□ 2.28
COL13A1-210ENST00000517713 LZTFL1Q9NQ48 299 aa29.32■■■□□ 2.28
COL13A1-210ENST00000517713 POLR2AP24928 1970 aaKnown RBP29.31■■■□□ 2.28
COL13A1-210ENST00000517713 SFI1A8K8P3 1242 aa29.31■■■□□ 2.28
COL13A1-210ENST00000517713 CETN3O15182 167 aa29.31■■■□□ 2.28
COL13A1-210ENST00000517713 GCNT3O95395 438 aa29.31■■■□□ 2.28
COL13A1-210ENST00000517713 TBC1D22BQ9NU19 505 aa29.31■■■□□ 2.28
COL13A1-210ENST00000517713 ZNHIT6Q9NWK9 470 aaKnown RBP29.31■■■□□ 2.28
COL13A1-210ENST00000517713 ZNF214Q9UL59 606 aaPredicted RBP29.31■■■□□ 2.28
COL13A1-210ENST00000517713 FANCGO15287 622 aa29.3■■■□□ 2.28
COL13A1-210ENST00000517713 P4HBP07237 508 aaKnown RBP29.3■■■□□ 2.28
COL13A1-210ENST00000517713 MYCT1Q8N699 235 aa29.3■■■□□ 2.28
COL13A1-210ENST00000517713 PURBQ96QR8 312 aaKnown RBP29.3■■■□□ 2.28
COL13A1-210ENST00000517713 EPN1Q9Y6I3 576 aaPredicted RBP29.3■■■□□ 2.28
COL13A1-210ENST00000517713 PDXKO00764 312 aa29.3■■■□□ 2.28
COL13A1-210ENST00000517713 CALUO43852 315 aaPredicted RBP29.3■■■□□ 2.28
COL13A1-210ENST00000517713 CASQ1P31415 396 aa29.3■■■□□ 2.28
COL13A1-210ENST00000517713 TMEM132BQ14DG7 1078 aa29.3■■■□□ 2.28
COL13A1-210ENST00000517713 MMRN2Q9H8L6 949 aa29.3■■■□□ 2.28
COL13A1-210ENST00000517713 RNF181Q9P0P0 153 aa29.3■■■□□ 2.28
COL13A1-210ENST00000517713 NDUFA10O95299 355 aa29.29■■■□□ 2.28
COL13A1-210ENST00000517713 NR2F2P24468 414 aa29.29■■■□□ 2.28
COL13A1-210ENST00000517713 TRIM59Q8IWR1 403 aa29.29■■■□□ 2.28
COL13A1-210ENST00000517713 WDR24Q96S15 920 aa29.29■■■□□ 2.28
COL13A1-210ENST00000517713 ZSWIM4Q9H7M6 989 aa29.29■■■□□ 2.28
COL13A1-210ENST00000517713 PARVGQ9HBI0 331 aa29.29■■■□□ 2.28
COL13A1-210ENST00000517713 A0A0U1RQJ8 604 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 ARHGEF35A5YM69 484 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 ATP2A1O14983 1001 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 SLU7O95391 586 aaKnown RBP29.28■■■□□ 2.28
COL13A1-210ENST00000517713 XRRA1Q6P2D8 792 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 ATRIPQ8WXE1 791 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 FAM207AQ9NSI2 230 aaPredicted RBP29.28■■■□□ 2.28
COL13A1-210ENST00000517713 ODF2LQ9ULJ1 636 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 SAMM50Q9Y512 469 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 LOXHD1Q8IVV2 1947 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 SH3D19Q5HYK7 790 aa29.28■■■□□ 2.28
COL13A1-210ENST00000517713 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms