RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 BRD3Q15059 726 aa18.43■□□□□ 0.54
CHMP7-203ENST00000517325 CACNA2D4Q7Z3S7 1137 aa18.43■□□□□ 0.54
CHMP7-203ENST00000517325 BHMT2Q9H2M3 363 aa18.43■□□□□ 0.54
CHMP7-203ENST00000517325 BCAS3Q9H6U6 928 aa18.43■□□□□ 0.54
CHMP7-203ENST00000517325 NLRC4Q9NPP4 1024 aa18.43■□□□□ 0.54
CHMP7-203ENST00000517325 HDAC9Q9UKV0 1011 aa18.43■□□□□ 0.54
CHMP7-203ENST00000517325 RAB21Q9UL25 225 aa18.43■□□□□ 0.54
CHMP7-203ENST00000517325 PCDHA13Q9Y5I0 950 aa18.43■□□□□ 0.54
CHMP7-203ENST00000517325 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.43■□□□□ 0.54
CHMP7-203ENST00000517325 RSPH10B2B2RC85 870 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 LCA5LO95447 670 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 RSPH10BP0C881 870 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 HOXD13P35453 343 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 APBA1Q02410 837 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 MIGA2Q7L4E1 593 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 OGFOD1Q8N543 542 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 PSMD1Q99460 953 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 CRACR2AQ9BSW2 395 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 RUSC1Q9BVN2 902 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 DEF6Q9H4E7 631 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 POLD4Q9HCU8 107 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 ANKRD65E5RJM6 399 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 EDRF1Q3B7T1 1238 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 HGSNATQ68CP4 663 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 SRLQ86TD4 932 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 RTKN2Q8IZC4 609 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 SECISBP2LQ93073 1101 aaKnown RBP18.42■□□□□ 0.54
CHMP7-203ENST00000517325 LSM14BQ9BX40 385 aaKnown RBP18.42■□□□□ 0.54
CHMP7-203ENST00000517325 EDEM3Q9BZQ6 932 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 TSGA10Q9BZW7 698 aa18.42■□□□□ 0.54
CHMP7-203ENST00000517325 RANBP17Q9H2T7 1088 aaKnown RBP18.42■□□□□ 0.54
CHMP7-203ENST00000517325 POTEB2H3BUK9 544 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 AKR1B10O60218 316 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 NR2F2P24468 414 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 TUBB4BP68371 445 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 UBXN2AP68543 259 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 PPP4R3CPQ6ZMV5 832 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 EPM2AIP1Q7L775 607 aaPredicted RBP18.41■□□□□ 0.54
CHMP7-203ENST00000517325 GOLGA5Q8TBA6 731 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 POLR3CQ9BUI4 534 aaPredicted RBP18.41■□□□□ 0.54
CHMP7-203ENST00000517325 GLIS2Q9BZE0 524 aaPredicted RBP18.41■□□□□ 0.54
CHMP7-203ENST00000517325 SH2D4AQ9H788 454 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 CEP72Q9P209 647 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 RRP15Q9Y3B9 282 aaKnown RBP18.41■□□□□ 0.54
CHMP7-203ENST00000517325 MYBP10242 640 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 ASTE1Q2TB18 679 aaPredicted RBP18.41■□□□□ 0.54
CHMP7-203ENST00000517325 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
CHMP7-203ENST00000517325 MMS19Q96T76 1030 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 VCPKMTQ9H867 229 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 MLXIPQ9HAP2 919 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 STK24Q9Y6E0 443 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 CAPN6Q9Y6Q1 641 aa18.41■□□□□ 0.54
CHMP7-203ENST00000517325 EXOC4Q96A65 974 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 CAPZA3Q96KX2 299 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 RABGAP1Q9Y3P9 1069 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 GCOM1H8Y6P7 765 aaPredicted RBP18.4■□□□□ 0.54
CHMP7-203ENST00000517325 CETN3O15182 167 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 TLR2O60603 784 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 PRPF6O94906 941 aaKnown RBP18.4■□□□□ 0.54
CHMP7-203ENST00000517325 POLR2MP0CAP2 368 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 KCNA3P22001 575 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 CTTNQ14247 550 aaKnown RBP18.4■□□□□ 0.54
CHMP7-203ENST00000517325 KNOP1Q1ED39 458 aaKnown RBP18.4■□□□□ 0.54
CHMP7-203ENST00000517325 OTOP1Q7RTM1 612 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 FBXO28Q9NVF7 368 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 TRAF3IP3Q9Y228 551 aa18.4■□□□□ 0.54
CHMP7-203ENST00000517325 ANO9A1A5B4 782 aa18.39■□□□□ 0.54
CHMP7-203ENST00000517325 CHMP2AO43633 222 aa18.39■□□□□ 0.54
CHMP7-203ENST00000517325 USO1O60763 962 aaKnown RBP18.39■□□□□ 0.54
CHMP7-203ENST00000517325 EYA4O95677 639 aa18.39■□□□□ 0.54
CHMP7-203ENST00000517325 ACTN2P35609 894 aa18.39■□□□□ 0.54
CHMP7-203ENST00000517325 POLR2FP61218 127 aaKnown RBP18.39■□□□□ 0.54
CHMP7-203ENST00000517325 VSNL1P62760 191 aa18.39■□□□□ 0.54
CHMP7-203ENST00000517325 GFPT1Q06210 699 aaPredicted RBP18.39■□□□□ 0.54
CHMP7-203ENST00000517325 PIGOQ8TEQ8 1089 aa18.39■□□□□ 0.54
CHMP7-203ENST00000517325 HSD17B14Q9BPX1 270 aa18.39■□□□□ 0.54
CHMP7-203ENST00000517325 MAP2K7O14733 419 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 ZNF185O15231 689 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 PHACTR2O75167 634 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 PSMD10O75832 226 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 DPEP1P16444 411 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 POLD1P28340 1107 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 GRIPAP1Q4V328 841 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 BEND6Q5SZJ8 279 aaPredicted RBP18.39■□□□□ 0.53
CHMP7-203ENST00000517325 LRCH2Q5VUJ6 765 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 CHURC1Q8WUH1 139 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 HNRNPLLQ8WVV9 542 aaKnown RBP18.39■□□□□ 0.53
CHMP7-203ENST00000517325 FAM184BQ9ULE4 1060 aa18.39■□□□□ 0.53
CHMP7-203ENST00000517325 MOCS3O95396 460 aa18.38■□□□□ 0.53
CHMP7-203ENST00000517325 KCNH2Q12809 1159 aa18.38■□□□□ 0.53
CHMP7-203ENST00000517325 TRAF1Q13077 416 aa18.38■□□□□ 0.53
CHMP7-203ENST00000517325 TDRD12Q587J7 1177 aaKnown RBP18.38■□□□□ 0.53
CHMP7-203ENST00000517325 ARHGAP27Q6ZUM4 889 aa18.38■□□□□ 0.53
CHMP7-203ENST00000517325 KIF13BQ9NQT8 1826 aa18.38■□□□□ 0.53
CHMP7-203ENST00000517325 SSU72P8A0A1W2PR75 194 aa18.38■□□□□ 0.53
CHMP7-203ENST00000517325 SLITRK3O94933 977 aa18.38■□□□□ 0.53
CHMP7-203ENST00000517325 CAP2P40123 477 aa18.38■□□□□ 0.53
CHMP7-203ENST00000517325 NOP2P46087 812 aaKnown RBP18.38■□□□□ 0.53
CHMP7-203ENST00000517325 RINT1Q6NUQ1 792 aa18.38■□□□□ 0.53
CHMP7-203ENST00000517325 TRIM58Q8NG06 486 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms