RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CD99P14209 185 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 PDE4AP27815 886 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 HOXC13P31276 330 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 GBP2P32456 591 aaPredicted RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 IL13P35225 146 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 UCNP55089 124 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 BTG3Q14201 252 aaPredicted RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 FHL5Q5TD97 284 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 BROXQ5VW32 411 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 PLPP4Q5VZY2 271 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 ZNF746Q6NUN9 644 aaPredicted RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 PDXDC2PQ6P474 469 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 TBC1D9Q6ZT07 1266 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 ARID3BQ8IVW6 561 aaPredicted RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 NAGSQ8N159 534 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 ST13P5Q8NFI4 369 aaPredicted RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 CCER1Q8TC90 406 aaPredicted RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 AFG1LQ8WV93 481 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 NXPE3Q969Y0 559 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 NXPE2Q96DL1 559 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 ZC3H10Q96K80 434 aaKnown RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 SIN3AQ96ST3 1273 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 IER2Q9BTL4 223 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 PI4K2AQ9BTU6 479 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 UNKQ9C0B0 810 aaKnown RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 RSPH6AQ9H0K4 717 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 OSBPL5Q9H0X9 879 aaPredicted RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 DIS3Q9Y2L1 958 aaKnown RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 COG6Q9Y2V7 657 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 PCDHB9Q9Y5E1 797 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 GTF3C3Q9Y5Q9 886 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 SCN10AQ9Y5Y9 1956 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 ASCC3Q8N3C0 2202 aaKnown RBP4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 DDTLA6NHG4 134 aaPredicted RBP4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 FAM196BA6NMK8 535 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 SPDYE16A6NNV3 312 aaPredicted RBP4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L15C9J2P7 530 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L13C9JLJ4 530 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L11C9JVI0 530 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L18D6R9N7 530 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L22D6RA61 530 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L17D6RBQ6 530 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L19D6RCP7 530 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L20D6RJB6 530 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 PROZP22891 400 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 PTGS1P23219 599 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 LTBQ06643 244 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 USP17L24Q0WX57 530 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 NBR1Q14596 966 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 MBTPS1Q14703 1052 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 PLK5Q496M5 336 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 CDCA8Q53HL2 280 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 ZNF484Q5JVG2 852 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 TMC5Q6UXY8 1006 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 TPRG1Q6ZUI0 275 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 NOL8Q76FK4 1167 aaKnown RBP4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 SH3BP5LQ7L8J4 393 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 TLK2Q86UE8 772 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 ZSCAN29Q8IWY8 852 aaPredicted RBP4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 PHC2Q8IXK0 858 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 HDDC3Q8N4P3 179 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 LURAP1Q96LR2 239 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 CDC5LQ99459 802 aaKnown RBP4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 LGMNQ99538 433 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 WDR18Q9BV38 432 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 SPATC1LQ9H0A9 340 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 MROH8Q9H579 483 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 RC3H2Q9HBD1 1191 aaKnown RBP4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 PLAAQ9Y263 795 aa4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 MRPL42Q9Y6G3 142 aaKnown RBP4.09□□□□□ -1.75
SCARNA13-201ENST00000516672 ATAD5Q96QE3 1844 aa4.09□□□□□ -1.76
SCARNA13-201ENST00000516672 ANK2Q01484 3957 aa4.09□□□□□ -1.76
SCARNA13-201ENST00000516672 ZNF469Q96JG9 3925 aaPredicted RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 ARHGAP10A1A4S6 786 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 SERINC4A6NH21 518 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 HIDE1A8MVS5 230 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 USP17L10C9JJH3 530 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 FSCN2O14926 492 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 HNRNPRO43390 633 aaKnown RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 SHOX2O60902 331 aaPredicted RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 FRAT2O75474 233 aaPredicted RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 ZMYM6O95789 1325 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 HMOX1P09601 288 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 CKBP12277 381 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 FECHP22830 423 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 ADCY7P51828 1080 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 POU4F1Q01851 419 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 VAC14Q08AM6 782 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 APOBRQ0VD83 1088 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 LMAN2Q12907 356 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 LBRQ14739 615 aaKnown RBP4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 PTGISQ16647 500 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 SKIDA1Q1XH10 827 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 CDC42EP5Q6NZY7 148 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 PDXDC1Q6P996 788 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 CATSPERGQ6ZRH7 1159 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 MCEMP1Q8IX19 187 aa4.08□□□□□ -1.76
SCARNA13-201ENST00000516672 GALNT15Q8N3T1 639 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms