RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 CELF5Q8N6W0 485 aaKnown RBP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 IGSF22Q8N9C0 903 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KYQ8NBH2 561 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KCT2Q8NC54 265 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RBBP8NLQ8NC74 664 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RNF169Q8NCN4 708 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PIK3C3Q8NEB9 887 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DNERQ8NFT8 737 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 OR2I1PQ8NGU4 316 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TGFBRAP1Q8WUH2 860 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CPLX3Q8WVH0 158 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DPF2Q92785 391 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DIO2Q92813 273 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FOXRED1Q96CU9 486 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GPRASP2Q96D09 838 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CHFRQ96EP1 664 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF503Q96F45 646 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TMEM169Q96HH4 297 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF496Q96IT1 587 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PHACTR3Q96KR7 559 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SORCS2Q96PQ0 1159 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PLEKHG4BQ96PX9 1271 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 APBA2Q99767 749 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZSWIM1Q9BR11 485 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TTPALQ9BTX7 342 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PLA2G12BQ9BX93 195 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ANO3Q9BYT9 981 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CPEB1Q9BZB8 566 aaKnown RBP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TRIM8Q9BZR9 551 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 VPS11Q9H270 941 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 C12orf65Q9H3J6 166 aaKnown RBP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SYNPO2LQ9H987 977 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CRTAC1Q9NQ79 661 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 JADE2Q9NQC1 790 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DMRT3Q9NQL9 472 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DLL4Q9NR61 685 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CYP26B1Q9NR63 512 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KCND1Q9NSA2 647 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 USP40Q9NVE5 1235 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RIC8BQ9NVN3 520 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 LRP2BPQ9P2M1 347 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NCDNQ9UBB6 729 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ASH2LQ9UBL3 628 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SLC45A2Q9UMX9 530 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZFR2Q9UPR6 939 aaKnown RBP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 INPP5FQ9Y2H2 1132 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FAN1Q9Y2M0 1017 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SAMM50Q9Y512 469 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CD2APQ9Y5K6 639 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TIMM13Q9Y5L4 95 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FHOD1Q9Y613 1164 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 X6R8D5 127 aa0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TCF20Q9UGU0 1960 aaKnown RBP0.61□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SETD1BQ9UPS6 1966 aaKnown RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 UBE2QL1A1L167 161 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GRXCR1A8MXD5 290 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PATE3B3GLJ2 98 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 H0Y858 1186 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 K7ESM1 405 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 WNT9AO14904 365 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KIAA0355O15063 1070 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ARHGAP6O43182 974 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DNAJC8O75937 253 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GLRX3O76003 335 aaKnown RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 APOL3O95236 402 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SOD2P04179 222 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ADRB1P08588 477 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FAHP16930 419 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PTPN1P18031 435 aaKnown RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FPR1P21462 350 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RPL13P26373 211 aaKnown RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ERCC5P28715 1186 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SLC6A4P31645 630 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GTF2F1P35269 517 aaKnown RBP eCLIP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PHKA1P46020 1223 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GJA8P48165 433 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 HNRNPMP52272 730 aaKnown RBP eCLIP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 HMGA2P52926 109 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CASP7P55210 303 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PPP2CBP62714 309 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PPP2CAP67775 309 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 POU4F1Q01851 419 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DUSP4Q13115 394 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 LSAMPQ13449 338 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FOXE3Q13461 319 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MOGSQ13724 837 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RRP1BQ14684 758 aaKnown RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MYBPC3Q14896 1274 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SNX17Q15036 470 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DALRD3Q5D0E6 543 aaKnown RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CT83Q5H943 113 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RRP12Q5JTH9 1297 aaKnown RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 HABP4Q5JVS0 413 aaKnown RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZBTB41Q5SVQ8 909 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZFYVE27Q5T4F4 411 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CWF19L1Q69YN2 538 aaKnown RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RCSD1Q6JBY9 416 aa0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ESRP1Q6NXG1 681 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms