RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 IFIH1Q9BYX4 1025 aaKnown RBP2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 AP5M1Q9H0R1 490 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 VCPKMTQ9H867 229 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 A1CFQ9NQ94 594 aaKnown RBP2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 JADE2Q9NQC1 790 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 ARHGEF3Q9NR81 526 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 TSHZ2Q9NRE2 1034 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 C2orf42Q9NWW7 574 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 HDAC6Q9UBN7 1215 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 DENND2AQ9ULE3 1009 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 HIVEP3Q5T1R4 2406 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 FRMPD2Q68DX3 1309 aaPredicted RBP2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 EMSYQ7Z589 1322 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 EVPLQ92817 2033 aa2.92□□□□□ -1.94
RNU1-48P-201ENST00000516400 MAP1AP78559 2803 aaPredicted RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 RSPH10B2B2RC85 870 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 B8ZZF3 427 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 GRM8O00222 908 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 CLASP2O75122 1294 aaKnown RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 CSPG5O95196 566 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 EPN2O95208 641 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 PAPSS2O95340 614 aaPredicted RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 MYL3P08590 195 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 IFIT1P09914 478 aaKnown RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 RSPH10BP0C881 870 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 CD72P21854 359 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 TARSP26639 723 aaKnown RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 COPB2P35606 906 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 GATMP50440 423 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 ATP8B2P98198 1209 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 NEXNQ0ZGT2 675 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 SERINC3Q13530 473 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 RAB3GAP1Q15042 981 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 CERKLQ49MI3 558 aaPredicted RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 CCDC102BQ68D86 513 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 TCEAL6Q6IPX3 200 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 PDE12Q6L8Q7 609 aaKnown RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 DCLRE1AQ6PJP8 1040 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 PI16Q6UXB8 463 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 NFXL1Q6ZNB6 911 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 TBC1D9Q6ZT07 1266 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 GPR149Q86SP6 731 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 CLEC10AQ8IUN9 316 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 MAPKAPK5Q8IW41 473 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 FBXO16Q8IX29 292 aaPredicted RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 SCUBE3Q8IX30 993 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 CMTR2Q8IYT2 770 aaKnown RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 SPICE1Q8N0Z3 855 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 MRPL43Q8N983 215 aaKnown RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 FAM181AQ8N9Y4 354 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 TDRD5Q8NAT2 981 aaKnown RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 DNAAF4Q8WXU2 420 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 TCEAL3Q969E4 200 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 DDX11Q96FC9 970 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 POM121Q96HA1 1249 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 CRBNQ96SW2 442 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 MYL10Q9BUA6 226 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 TEX13BQ9BXU2 312 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 RHOBTB2Q9BYZ6 727 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 ARRDC1-AS1Q9H2J1 176 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 SMOC1Q9H4F8 434 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 CWH43Q9H720 699 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 SLC38A10Q9HBR0 1119 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 LTB4R2Q9NPC1 389 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 SPATA6Q9NWH7 488 aaPredicted RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 HMG20BQ9P0W2 317 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 HCSTQ9UBK5 93 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 IL17BQ9UHF5 180 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 LZTS1Q9Y250 596 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 ANKHD1Q8IWZ3 2542 aaKnown RBP2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 RYR3Q15413 4870 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 SVILO95425 2214 aa2.91□□□□□ -1.94
RNU1-48P-201ENST00000516400 FSD2A1L4K1 749 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 FAM205CA6NFA0 338 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 C2orf71A6NGG8 1288 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 FAM170BA6NMN3 283 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 EIF4E1BA6NMX2 242 aaKnown RBP2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 C4orf47A7E2U8 309 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 EYA2O00167 538 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 TERTO14746 1132 aaKnown RBP2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 ATMINO43313 823 aaPredicted RBP2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 KPNA6O60684 536 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 FGF18O76093 207 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 DKK1O94907 266 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 CHRNA1P02708 482 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 ITGB2P05107 769 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 EPCAMP16422 314 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 EDNRBP24530 442 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 ITPKBP27987 946 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 CNR2P34972 360 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 TIE1P35590 1138 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 MAGEA9P43362 315 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 CPT1AP50416 773 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 GPC5P78333 572 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 MGAT3Q09327 533 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 APOBRQ0VD83 1088 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 SEMA3FQ13275 785 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 HTR4Q13639 388 aa2.9□□□□□ -1.95
RNU1-48P-201ENST00000516400 SIM2Q14190 667 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms