RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 SCN10AQ9Y5Y9 1956 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 A0A0U1RQG5 324 aaPredicted RBP16.97■□□□□ 0.31
PDCD6-211ENST00000515587 ATG7O95352 703 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 COL6A1P12109 1028 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 PRPHP41219 470 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 PPP2R5CQ13362 524 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 SF3A1Q15459 793 aaKnown RBP16.97■□□□□ 0.31
PDCD6-211ENST00000515587 NCAPH2Q6IBW4 605 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 FAM173BQ6P4H8 233 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 ABHD15Q6UXT9 468 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 DTHD1Q6ZMT9 781 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 SEZ6LQ9BYH1 1024 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 VAV3Q9UKW4 847 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 ALPK3Q96L96 1907 aa16.97■□□□□ 0.31
PDCD6-211ENST00000515587 EMSYQ7Z589 1322 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 H3BRB1 525 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 LGR5O75473 907 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 F2P00734 622 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 PSEN2P49810 448 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 STAT5BP51692 787 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 ATP2C1P98194 919 aaPredicted RBP16.96■□□□□ 0.31
PDCD6-211ENST00000515587 MFSD10Q14728 455 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 ATL3Q6DD88 541 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 C4orf32Q8N8J7 132 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 TNPO1Q92973 898 aaKnown RBP16.96■□□□□ 0.31
PDCD6-211ENST00000515587 IPO9Q96P70 1041 aaKnown RBP16.96■□□□□ 0.31
PDCD6-211ENST00000515587 TUT1Q9H6E5 874 aaKnown RBP16.96■□□□□ 0.31
PDCD6-211ENST00000515587 ZNF302Q9NR11 478 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 ERAP1Q9NZ08 941 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 CIZ1Q9ULV3 898 aaPredicted RBP16.96■□□□□ 0.31
PDCD6-211ENST00000515587 TELO2Q9Y4R8 837 aa16.96■□□□□ 0.31
PDCD6-211ENST00000515587 SPTBN5Q9NRC6 3674 aaKnown RBP16.95■□□□□ 0.3
PDCD6-211ENST00000515587 DNAH12Q6ZR08 3092 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 COL9A1P20849 921 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 TECP42680 631 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 SLC26A2P50443 739 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 PSMC6P62333 389 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
PDCD6-211ENST00000515587 ITGA7Q13683 1181 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 KIAA0753Q2KHM9 967 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 FOXD4L6Q3SYB3 417 aaPredicted RBP16.95■□□□□ 0.3
PDCD6-211ENST00000515587 ARL6IP4Q66PJ3 421 aaKnown RBP16.95■□□□□ 0.3
PDCD6-211ENST00000515587 SWSAP1Q6NVH7 229 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 PDXDC2PQ6P474 469 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 FOXD4L3Q6VB84 417 aaPredicted RBP16.95■□□□□ 0.3
PDCD6-211ENST00000515587 PLPPR4Q7Z2D5 763 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 C7orf31Q8N865 590 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 FAM161BQ96MY7 647 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 C16orf70Q9BSU1 422 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 UBE2OQ9C0C9 1292 aaKnown RBP16.95■□□□□ 0.3
PDCD6-211ENST00000515587 CFAP45Q9UL16 551 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 CLIC4Q9Y696 253 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 STK24Q9Y6E0 443 aa16.95■□□□□ 0.3
PDCD6-211ENST00000515587 TTC28Q96AY4 2481 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 IGKV6D-21A0A0A0MT36 114 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 DKC1O60832 514 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDCD6-211ENST00000515587 DDIT3P35638 169 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDCD6-211ENST00000515587 ATN1P54259 1190 aaPredicted RBP16.94■□□□□ 0.3
PDCD6-211ENST00000515587 STK38Q15208 465 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 EPHA7Q15375 998 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 NBPF20Q3BBV1 942 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 FAM47CQ5HY64 1035 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 B3GNT9Q6UX72 402 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 SLC39A5Q6ZMH5 540 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 TRIM50Q86XT4 487 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 CKAP2LQ8IYA6 745 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 ERMNQ8TAM6 284 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 AFAP1L1Q8TED9 768 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 KAT2BQ92831 832 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 ATP6V0A1Q93050 837 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 GABBR1Q9UBS5 961 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 MROH7Q68CQ1 1323 aa16.94■□□□□ 0.3
PDCD6-211ENST00000515587 ARVCFO00192 962 aa16.93■□□□□ 0.3
PDCD6-211ENST00000515587 SPIRE1Q08AE8 756 aa16.93■□□□□ 0.3
PDCD6-211ENST00000515587 PDIA5Q14554 519 aa16.93■□□□□ 0.3
PDCD6-211ENST00000515587 NFRKBQ6P4R8 1299 aa16.93■□□□□ 0.3
PDCD6-211ENST00000515587 CCDC60Q8IWA6 550 aaPredicted RBP16.93■□□□□ 0.3
PDCD6-211ENST00000515587 NEK9Q8TD19 979 aa16.93■□□□□ 0.3
PDCD6-211ENST00000515587 USP28Q96RU2 1077 aa16.93■□□□□ 0.3
PDCD6-211ENST00000515587 TFIP11Q9UBB9 837 aaKnown RBP16.93■□□□□ 0.3
PDCD6-211ENST00000515587 LRWD1Q9UFC0 647 aa16.93■□□□□ 0.3
PDCD6-211ENST00000515587 RAPGEFL1Q9UHV5 662 aa16.93■□□□□ 0.3
PDCD6-211ENST00000515587 TRPC6Q9Y210 931 aa16.93■□□□□ 0.3
PDCD6-211ENST00000515587 VWA3AA6NCI4 1184 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 POTEMA6NI47 508 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 HAS3O00219 553 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 EML1O00423 815 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 TLR3O15455 904 aaKnown RBP16.92■□□□□ 0.3
PDCD6-211ENST00000515587 P4HBP07237 508 aaKnown RBP16.92■□□□□ 0.3
PDCD6-211ENST00000515587 NCLP19338 710 aaKnown RBP16.92■□□□□ 0.3
PDCD6-211ENST00000515587 MARK3P27448 753 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 PSMC5P62195 406 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 PTPN11Q06124 597 aaPredicted RBP16.92■□□□□ 0.3
PDCD6-211ENST00000515587 FAM167AQ96KS9 214 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 PCYT2Q99447 389 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 FTOQ9C0B1 505 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDCD6-211ENST00000515587 CHMP5Q9NZZ3 219 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 MAFBQ9Y5Q3 323 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms