RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 REXO1Q8N1G1 1221 aaKnown RBP19.93■□□□□ 0.78
DDX41-217ENST00000515562 IFIH1Q9BYX4 1025 aaKnown RBP19.93■□□□□ 0.78
DDX41-217ENST00000515562 C6orf50Q9HD87 102 aa19.93■□□□□ 0.78
DDX41-217ENST00000515562 INSL6Q9Y581 213 aa19.93■□□□□ 0.78
DDX41-217ENST00000515562 MTCH2Q9Y6C9 303 aa19.93■□□□□ 0.78
DDX41-217ENST00000515562 TRANK1O15050 2925 aa19.93■□□□□ 0.78
DDX41-217ENST00000515562 COL4A6Q14031 1691 aa19.92■□□□□ 0.78
DDX41-217ENST00000515562 RFXAPO00287 272 aa19.92■□□□□ 0.78
DDX41-217ENST00000515562 ARP10275 920 aa19.92■□□□□ 0.78
DDX41-217ENST00000515562 GNA11P29992 359 aa19.92■□□□□ 0.78
DDX41-217ENST00000515562 ITGB3BPQ13352 177 aaPredicted RBP19.92■□□□□ 0.78
DDX41-217ENST00000515562 JAKMIP3Q5VZ66 844 aa19.92■□□□□ 0.78
DDX41-217ENST00000515562 FAM117BQ6P1L5 589 aa19.92■□□□□ 0.78
DDX41-217ENST00000515562 RUFY4Q6ZNE9 571 aa19.92■□□□□ 0.78
DDX41-217ENST00000515562 CCDC148Q8NFR7 591 aa19.92■□□□□ 0.78
DDX41-217ENST00000515562 RNF26Q9BY78 433 aaPredicted RBP19.92■□□□□ 0.78
DDX41-217ENST00000515562 SIP14410 1827 aa19.92■□□□□ 0.78
DDX41-217ENST00000515562 LINC01553A4QN01 128 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 CYP3A4P08684 503 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 SLC26A2P50443 739 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 EVCP57679 992 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 SETQ01105 290 aaPredicted RBP19.91■□□□□ 0.78
DDX41-217ENST00000515562 GRB10Q13322 594 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 PKN1Q16512 942 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 RUFY3Q7L099 469 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 PLPPR4Q7Z2D5 763 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 BICD2Q8TD16 824 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 TGS1Q96RS0 853 aaKnown RBP19.91■□□□□ 0.78
DDX41-217ENST00000515562 PCYT2Q99447 389 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 TRPC6Q9Y210 931 aa19.91■□□□□ 0.78
DDX41-217ENST00000515562 CHRNA1P02708 482 aa19.9■□□□□ 0.78
DDX41-217ENST00000515562 IFNAR1P17181 557 aa19.9■□□□□ 0.78
DDX41-217ENST00000515562 STAT5BP51692 787 aa19.9■□□□□ 0.78
DDX41-217ENST00000515562 ERVK-21P61565 698 aa19.9■□□□□ 0.78
DDX41-217ENST00000515562 MRPS5P82675 430 aaKnown RBP19.9■□□□□ 0.78
DDX41-217ENST00000515562 HTRA4P83105 476 aaPredicted RBP19.9■□□□□ 0.78
DDX41-217ENST00000515562 MARCH8Q5T0T0 291 aa19.9■□□□□ 0.78
DDX41-217ENST00000515562 PLA2G4DQ86XP0 818 aa19.9■□□□□ 0.78
DDX41-217ENST00000515562 CRYGNQ8WXF5 182 aa19.9■□□□□ 0.78
DDX41-217ENST00000515562 PHKBQ93100 1093 aa19.9■□□□□ 0.78
DDX41-217ENST00000515562 ASB2Q96Q27 587 aa19.9■□□□□ 0.78
DDX41-217ENST00000515562 SPTBN5Q9NRC6 3674 aaKnown RBP19.9■□□□□ 0.78
DDX41-217ENST00000515562 FAM86B1E9PN63 330 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 FAM86B2P0C5J1 330 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 INSRRP14616 1297 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 PDIA3P30101 505 aaKnown RBP19.89■□□□□ 0.77
DDX41-217ENST00000515562 IGBP1P78318 339 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 MGAT3Q09327 533 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 NTRK3Q16288 839 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 SPRED2Q7Z698 418 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 IL27Q8NEV9 243 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 SP7Q8TDD2 431 aaPredicted RBP19.89■□□□□ 0.77
DDX41-217ENST00000515562 GDPD5Q8WTR4 605 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 TOP1MTQ969P6 601 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 YME1L1Q96TA2 773 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 SLC26A6Q9BXS9 759 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 ZSWIM6Q9HCJ5 1215 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 LMCD1Q9NZU5 365 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 CYP46A1Q9Y6A2 500 aa19.89■□□□□ 0.77
DDX41-217ENST00000515562 PRRC2BQ5JSZ5 2229 aaKnown RBP19.88■□□□□ 0.77
DDX41-217ENST00000515562 IGLV3-22A0A075B6J6 115 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.88■□□□□ 0.77
DDX41-217ENST00000515562 IPO5O00410 1097 aaKnown RBP19.88■□□□□ 0.77
DDX41-217ENST00000515562 LPXNO60711 386 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 ATG7O95352 703 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 GHRP10912 638 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 PLCB4Q15147 1175 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 SKIV2LQ15477 1246 aaKnown RBP19.88■□□□□ 0.77
DDX41-217ENST00000515562 AAK1Q2M2I8 961 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 FAM160B1Q5W0V3 765 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 DNAJB3Q8WWF6 145 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 OSBPL7Q9BZF2 842 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 TM6SF1Q9BZW5 370 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 MTUS1Q9ULD2 1270 aa19.88■□□□□ 0.77
DDX41-217ENST00000515562 IGKV6D-21A0A0A0MT36 114 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 POTEB3A0JP26 581 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 M0QZ92 97 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 DDX39AO00148 427 aaKnown RBP19.87■□□□□ 0.77
DDX41-217ENST00000515562 BACH1O14867 736 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 CCNE2O96020 404 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 MRPS6P82932 125 aaKnown RBP19.87■□□□□ 0.77
DDX41-217ENST00000515562 TOB2Q14106 344 aaPredicted RBP19.87■□□□□ 0.77
DDX41-217ENST00000515562 LPIN1Q14693 890 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 IER5Q5VY09 327 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 POTEBQ6S5H4 581 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 TSHZ1Q6ZSZ6 1077 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 TRIM22Q8IYM9 498 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 FAM49AQ9H0Q0 323 aaPredicted RBP19.87■□□□□ 0.77
DDX41-217ENST00000515562 SH3GLB2Q9NR46 395 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 TBC1D22BQ9NU19 505 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 TCEAL9Q9UHQ7 104 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 PCDHA2Q9Y5H9 948 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 CDY2AQ9Y6F7 541 aa19.87■□□□□ 0.77
DDX41-217ENST00000515562 CCT2P78371 535 aaKnown RBP19.86■□□□□ 0.77
DDX41-217ENST00000515562 FBXO47Q5MNV8 452 aa19.86■□□□□ 0.77
DDX41-217ENST00000515562 KRT40Q6A162 431 aa19.86■□□□□ 0.77
DDX41-217ENST00000515562 MIS18BP1Q6P0N0 1132 aa19.86■□□□□ 0.77
DDX41-217ENST00000515562 ABHD15Q6UXT9 468 aa19.86■□□□□ 0.77
DDX41-217ENST00000515562 SAMD11Q96NU1 681 aa19.86■□□□□ 0.77
DDX41-217ENST00000515562 ZNF577Q9BSK1 485 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms