RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 MAFAQ8NHW3 353 aaPredicted RBP27.83■■■□□ 2.05
SNF8-213ENST00000514929 PRDM12Q9H4Q4 367 aa27.83■■■□□ 2.05
SNF8-213ENST00000514929 TUBE1Q9UJT0 475 aa27.83■■■□□ 2.05
SNF8-213ENST00000514929 TPCN1Q9ULQ1 816 aa27.83■■■□□ 2.05
SNF8-213ENST00000514929 PCDHA4Q9UN74 947 aa27.83■■■□□ 2.05
SNF8-213ENST00000514929 TRPC6Q9Y210 931 aa27.83■■■□□ 2.05
SNF8-213ENST00000514929 CCNE2O96020 404 aa27.82■■■□□ 2.04
SNF8-213ENST00000514929 AK2P54819 239 aa27.82■■■□□ 2.04
SNF8-213ENST00000514929 TCTN1Q2MV58 587 aa27.82■■■□□ 2.04
SNF8-213ENST00000514929 PRR16Q569H4 304 aa27.82■■■□□ 2.04
SNF8-213ENST00000514929 TAF2Q6P1X5 1199 aa27.82■■■□□ 2.04
SNF8-213ENST00000514929 PLPPR4Q7Z2D5 763 aa27.82■■■□□ 2.04
SNF8-213ENST00000514929 DBF4BQ8NFT6 615 aa27.82■■■□□ 2.04
SNF8-213ENST00000514929 GAS2L1Q99501 681 aaPredicted RBP27.82■■■□□ 2.04
SNF8-213ENST00000514929 BACH1O14867 736 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 PFKFB2O60825 505 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 ATG7O95352 703 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 CA3P07451 260 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 INSRRP14616 1297 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 CIITAP33076 1130 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 RUFY4Q6ZNE9 571 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 AIFM3Q96NN9 605 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 TBC1D22BQ9NU19 505 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 TCEAL9Q9UHQ7 104 aa27.81■■■□□ 2.04
SNF8-213ENST00000514929 RRN3P2A6NIE6 340 aa27.8■■■□□ 2.04
SNF8-213ENST00000514929 DHX15O43143 795 aaKnown RBP27.8■■■□□ 2.04
SNF8-213ENST00000514929 DEFB103AP81534 67 aa27.8■■■□□ 2.04
SNF8-213ENST00000514929 PLCB4Q15147 1175 aa27.8■■■□□ 2.04
SNF8-213ENST00000514929 PLEKHG4Q58EX7 1191 aa27.8■■■□□ 2.04
SNF8-213ENST00000514929 FAM160B1Q5W0V3 765 aa27.8■■■□□ 2.04
SNF8-213ENST00000514929 RSPH3Q86UC2 560 aa27.8■■■□□ 2.04
SNF8-213ENST00000514929 BLIDQ8IZY5 108 aa27.8■■■□□ 2.04
SNF8-213ENST00000514929 ZBED2Q9BTP6 218 aa27.8■■■□□ 2.04
SNF8-213ENST00000514929 C22orf23Q9BZE7 217 aa27.8■■■□□ 2.04
SNF8-213ENST00000514929 MBLAC1A4D2B0 266 aaPredicted RBP27.79■■■□□ 2.04
SNF8-213ENST00000514929 RBAK-RBAKDNI3L0D1 243 aa27.79■■■□□ 2.04
SNF8-213ENST00000514929 TLL1O43897 1013 aa27.79■■■□□ 2.04
SNF8-213ENST00000514929 SLC26A2P50443 739 aa27.79■■■□□ 2.04
SNF8-213ENST00000514929 USP11P51784 963 aa27.79■■■□□ 2.04
SNF8-213ENST00000514929 FAM26DQ5JW98 314 aa27.79■■■□□ 2.04
SNF8-213ENST00000514929 MARCH8Q5T0T0 291 aa27.79■■■□□ 2.04
SNF8-213ENST00000514929 MIS18BP1Q6P0N0 1132 aa27.79■■■□□ 2.04
SNF8-213ENST00000514929 ABHD15Q6UXT9 468 aa27.79■■■□□ 2.04
SNF8-213ENST00000514929 FAM177A1Q8N128 213 aaPredicted RBP27.79■■■□□ 2.04
SNF8-213ENST00000514929 SEPT8Q92599 483 aa27.79■■■□□ 2.04
SNF8-213ENST00000514929 CHD9Q3L8U1 2897 aa27.78■■■□□ 2.04
SNF8-213ENST00000514929 IGKV6D-21A0A0A0MT36 114 aa27.78■■■□□ 2.04
SNF8-213ENST00000514929 SEC24BO95487 1268 aa27.78■■■□□ 2.04
SNF8-213ENST00000514929 GALNT17Q6IS24 598 aa27.78■■■□□ 2.04
SNF8-213ENST00000514929 TMCO2Q7Z6W1 182 aaPredicted RBP27.78■■■□□ 2.04
SNF8-213ENST00000514929 RPAINQ86UA6 219 aa27.78■■■□□ 2.04
SNF8-213ENST00000514929 TBCKQ8TEA7 893 aa27.78■■■□□ 2.04
SNF8-213ENST00000514929 IL17RAQ96F46 866 aa27.78■■■□□ 2.04
SNF8-213ENST00000514929 STK36Q9NRP7 1315 aa27.77■■■□□ 2.04
SNF8-213ENST00000514929 POTEB3A0JP26 581 aa27.77■■■□□ 2.04
SNF8-213ENST00000514929 ZNF746Q6NUN9 644 aaPredicted RBP27.77■■■□□ 2.04
SNF8-213ENST00000514929 POTEBQ6S5H4 581 aa27.77■■■□□ 2.04
SNF8-213ENST00000514929 DAGLBQ8NCG7 672 aa27.77■■■□□ 2.04
SNF8-213ENST00000514929 DNAJB3Q8WWF6 145 aa27.77■■■□□ 2.04
SNF8-213ENST00000514929 ZNF302Q9NR11 478 aa27.77■■■□□ 2.04
SNF8-213ENST00000514929 PTPRSQ13332 1948 aa27.77■■■□□ 2.04
SNF8-213ENST00000514929 XBP1P17861 261 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 NEK4P51957 841 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 KRT76Q01546 638 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 SWSAP1Q6NVH7 229 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 PDXDC2PQ6P474 469 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 CCDC60Q8IWA6 550 aaPredicted RBP27.76■■■□□ 2.03
SNF8-213ENST00000514929 TRAPPC12Q8WVT3 735 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 LENG9Q96B70 501 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 ZBTB10Q96DT7 871 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 OSBPL7Q9BZF2 842 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 KCNJ14Q9UNX9 436 aa27.76■■■□□ 2.03
SNF8-213ENST00000514929 CHRNA1P02708 482 aa27.75■■■□□ 2.03
SNF8-213ENST00000514929 AMHP03971 560 aa27.75■■■□□ 2.03
SNF8-213ENST00000514929 RPLP2P05387 115 aaKnown RBP27.75■■■□□ 2.03
SNF8-213ENST00000514929 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.75■■■□□ 2.03
SNF8-213ENST00000514929 SMAP1Q8IYB5 467 aaPredicted RBP27.75■■■□□ 2.03
SNF8-213ENST00000514929 FAM49AQ9H0Q0 323 aaPredicted RBP27.75■■■□□ 2.03
SNF8-213ENST00000514929 EDIL3O43854 480 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 HBP1O60381 514 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 DTNBO60941 627 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 GJB5O95377 273 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 IGFBP4P22692 258 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 FAM117BQ6P1L5 589 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 ATP8B4Q8TF62 1192 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 APBB2Q92870 758 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 IFIH1Q9BYX4 1025 aaKnown RBP27.74■■■□□ 2.03
SNF8-213ENST00000514929 CERS4Q9HA82 394 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 SAMM50Q9Y512 469 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 EYSQ5T1H1 3165 aa27.74■■■□□ 2.03
SNF8-213ENST00000514929 M0R2N6 131 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 MSH4O15457 936 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 PSAPP07602 524 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 GHRP10912 638 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 TAP1Q03518 808 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 MGAT3Q09327 533 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 NONOQ15233 471 aaKnown RBP eCLIP27.73■■■□□ 2.03
SNF8-213ENST00000514929 NPY5RQ15761 445 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 ME3Q16798 604 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 KRT25Q7Z3Z0 450 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms