RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 TRIM28Q13263 835 aaKnown RBP8.12□□□□□ -1.11
CCDC30-214ENST00000514642 LAMC2Q13753 1193 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 FAM117BQ6P1L5 589 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 LRRC31Q6UY01 552 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 RASGRP4Q8TDF6 673 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 SH3TC2Q8TF17 1288 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 BAG1Q99933 345 aaPredicted RBP8.12□□□□□ -1.11
CCDC30-214ENST00000514642 MROH8Q9H579 483 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 TRPC7Q9HCX4 862 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 DCP1AQ9NPI6 582 aaPredicted RBP8.12□□□□□ -1.11
CCDC30-214ENST00000514642 STARD7Q9NQZ5 370 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 ASIC3Q9UHC3 531 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 AMFRQ9UKV5 643 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 TNS2Q63HR2 1409 aa8.12□□□□□ -1.11
CCDC30-214ENST00000514642 SPATA31D1Q6ZQQ2 1576 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 DDNO94850 711 aaPredicted RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 P4HBP07237 508 aaKnown RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 GARSP41250 739 aaKnown RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 ST8SIA6P61647 398 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 RRAGAQ7L523 313 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 SPATA2LQ8IUW3 424 aaPredicted RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 JPH1Q9HDC5 661 aaPredicted RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 KIDINS220Q9ULH0 1771 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 PRRG1O14668 218 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 ZWINTO95229 277 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 CTSHP09668 335 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 PEX3P56589 373 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 COG7P83436 770 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 EFHBQ8N7U6 833 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 ATP2A3Q93084 1043 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 OSBP2Q969R2 916 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 FAM20AQ96MK3 541 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 STRBPQ96SI9 672 aaKnown RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 FAM50BQ9Y247 325 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 KCNJ18B7U540 433 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 LRG1P02750 347 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 AFPP02771 609 aaKnown RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 KCNJ12Q14500 433 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 RNF187Q5TA31 235 aaPredicted RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 SEPT8Q92599 483 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 TRPV6Q9H1D0 765 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 TMEM39AQ9NV64 488 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 MYL1P05976 194 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 ITGA4P13612 1032 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 PEX26Q7Z412 305 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 DDX53Q86TM3 631 aaKnown RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 CCDC110Q8TBZ0 833 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 C16orf45Q96MC5 204 aaPredicted RBP8.11□□□□□ -1.11
CCDC30-214ENST00000514642 KCNK9Q9NPC2 374 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 RIC8AQ9NPQ8 531 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 STAT5BP51692 787 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 EXOC3L4Q17RC7 722 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 SCARA5Q6ZMJ2 495 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 YME1L1Q96TA2 773 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 SLC38A7Q9NVC3 462 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 SYNGAP1Q96PV0 1343 aa8.11□□□□□ -1.11
CCDC30-214ENST00000514642 STAMQ92783 540 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 TMEM39BQ9GZU3 492 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 SYNDIG1Q9H7V2 258 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 ANGPTL3Q9Y5C1 460 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 H7C4K7 107 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 NKRFO15226 690 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 AMHP03971 560 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 ERCC3P19447 782 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 EFNA5P52803 228 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 TPD52P55327 224 aaPredicted RBP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 NR1H3Q13133 447 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 ORC2Q13416 577 aaPredicted RBP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 PNOCQ13519 176 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 ME3Q16798 604 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 KIAA1755Q5JYT7 1200 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 GLB1LQ6UWU2 654 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 IFT81Q8WYA0 676 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 ZSWIM5Q9P217 1185 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 PCDHB8Q9UN66 801 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 TMEM88BA6NKF7 163 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 H7C0C1 242 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 PHBP35232 272 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 QARSP47897 775 aaKnown RBP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 ATP5OP48047 213 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 MAP1SQ66K74 1059 aaPredicted RBP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 STKLD1Q8NE28 680 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 COLEC11Q9BWP8 271 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 HMX1Q9NP08 348 aaPredicted RBP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 CPA4Q9UI42 421 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 HOXC6P09630 235 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 FLT1P17948 1338 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 DDIT3P35638 169 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 FOXO4P98177 505 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 KARSQ15046 597 aaKnown RBP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 MYPNQ86TC9 1320 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 CCDC105Q8IYK2 499 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 UBLCP1Q8WVY7 318 aaPredicted RBP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 ACAP3Q96P50 834 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 NYAP2Q9P242 653 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 SUCLA2Q9P2R7 463 aaPredicted RBP8.1□□□□□ -1.11
CCDC30-214ENST00000514642 BTBD18B2RXH4 712 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 PDHXO00330 501 aa8.1□□□□□ -1.11
CCDC30-214ENST00000514642 RGL2O15211 777 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms