RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PTX3P26022 381 aaPredicted RBP7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 EPHB3P54753 998 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 TMPRSS15P98073 1019 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 TMEM132BQ14DG7 1078 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 ESRP1Q6NXG1 681 aaKnown RBP7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 CC2D1AQ6P1N0 951 aaPredicted RBP7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 TEPPQ6URK8 271 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 ETV3LQ6ZN32 361 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 PROSER1Q86XN7 944 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 COG1Q8WTW3 980 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 STAG1Q8WVM7 1258 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 TOE1Q96GM8 510 aaKnown RBP7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 MS4A5Q9H3V2 200 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 GCM1Q9NP62 436 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 SIRT5Q9NXA8 310 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 FAM53CQ9NYF3 392 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 PHLDB1Q86UU1 1377 aa7.17□□□□□ -1.26
HMGCS1-207ENST00000514610 TEX51A0A1B0GUA7 166 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 PRAMEF25A6NGN4 478 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 PPM1GO15355 546 aaPredicted RBP7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 MMEP08473 750 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 CPEP16870 476 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 SDHAP31040 664 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 FAM50AQ14320 339 aaKnown RBP7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 ATP13A4Q4VNC1 1196 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 IGDCC3Q8IVU1 814 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 CPA5Q8WXQ8 436 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 YIPF4Q9BSR8 244 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 HSPBP1Q9NZL4 362 aa7.16□□□□□ -1.26
HMGCS1-207ENST00000514610 FOXP2O15409 715 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 IGFBP6P24592 240 aaPredicted RBP7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 SMAD3P84022 425 aaKnown RBP7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 OCRLQ01968 901 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 CACNB2Q08289 660 aaPredicted RBP7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 ZNF174Q15697 407 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 SMAD2Q15796 467 aaKnown RBP7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 CD276Q5ZPR3 534 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 LIPIQ6XZB0 460 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 SPATS2Q86XZ4 545 aaKnown RBP7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 ASB15Q8WXK1 588 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 TRIM8Q9BZR9 551 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 RNF38Q9H0F5 515 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 PCIF1Q9H4Z3 704 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 ZMAT4Q9H898 229 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 VTA1Q9NP79 307 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 TOMM22Q9NS69 142 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 BTBD7Q9P203 1132 aa7.15□□□□□ -1.26
HMGCS1-207ENST00000514610 NCAM1P13591 858 aa7.14□□□□□ -1.27
HMGCS1-207ENST00000514610 DBPQ10586 325 aaPredicted RBP7.14□□□□□ -1.27
HMGCS1-207ENST00000514610 RNF219Q5W0B1 726 aaPredicted RBP7.14□□□□□ -1.27
HMGCS1-207ENST00000514610 CD300LDQ6UXZ3 194 aa7.14□□□□□ -1.27
HMGCS1-207ENST00000514610 FBXO15Q8NCQ5 510 aaPredicted RBP7.14□□□□□ -1.27
HMGCS1-207ENST00000514610 MZB1Q8WU39 189 aa7.14□□□□□ -1.27
HMGCS1-207ENST00000514610 SLC5A5Q92911 643 aa7.14□□□□□ -1.27
HMGCS1-207ENST00000514610 ACSS2Q9NR19 701 aa7.14□□□□□ -1.27
HMGCS1-207ENST00000514610 DDX56Q9NY93 547 aaKnown RBP7.14□□□□□ -1.27
HMGCS1-207ENST00000514610 LCHNA4D1U4 455 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 PRKD3O94806 890 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 AOAHP28039 575 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 MC4RP32245 332 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 GUCY2FP51841 1108 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 HERVK_113P62684 666 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 MESP2Q0VG99 397 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 TERF2Q15554 542 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 TARBP2Q15633 366 aaKnown RBP7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 BROXQ5VW32 411 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 TMEM132EQ6IEE7 984 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 C11orf74Q86VG3 221 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 CLRN3Q8NCR9 226 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 SMARCC2Q8TAQ2 1214 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 FOXRED1Q96CU9 486 aaPredicted RBP7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 DDX11Q96FC9 970 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 C16orf92Q96LL3 132 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 GBP4Q96PP9 640 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 SLC5A4Q9NY91 659 aa7.13□□□□□ -1.27
HMGCS1-207ENST00000514610 N4BP3O15049 544 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 PAX4O43316 350 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 SEMA7AO75326 666 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 KATNA1O75449 491 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 MPIG6BO95866 241 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 TMEM253P0C7T8 217 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 DLG4P78352 724 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 NKX3-2P78367 333 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 DDB1Q16531 1140 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 BRDTQ58F21 947 aaPredicted RBP7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 TMC5Q6UXY8 1006 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 HDGFL2Q7Z4V5 671 aaPredicted RBP7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 NECAB2Q7Z6G3 386 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 B3GNT8Q7Z7M8 397 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 RTN4RL1Q86UN2 441 aaPredicted RBP7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 NOX5Q96PH1 765 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 SLC39A2Q9NP94 309 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 HOMER2Q9NSB8 354 aa7.12□□□□□ -1.27
HMGCS1-207ENST00000514610 WASHC2CQ9Y4E1 1318 aa7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 ZNF839A8K0R7 811 aa7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 CYP17A1P05093 508 aa7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 LIMS1P48059 325 aa7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 FNTBP49356 437 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms