RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 ZRANB2O95218 330 aaKnown RBP eCLIP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 INPP5BP32019 993 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 EIF4A3P38919 411 aaKnown RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 PTGER2P43116 358 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 KIF11P52732 1056 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 RASA3Q14644 834 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 SPA17Q15506 151 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 TRAPPC11Q7Z392 1133 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 CACNA2D4Q7Z3S7 1137 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 TPH2Q8IWU9 490 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 KRT222Q8N1A0 295 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 KCTD17Q8N5Z5 321 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 PURBQ96QR8 312 aaKnown RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 LSM14BQ9BX40 385 aaKnown RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 EDEM3Q9BZQ6 932 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 BCAS3Q9H6U6 928 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 POLD4Q9HCU8 107 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 CEP72Q9P209 647 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 TRAF3IP3Q9Y228 551 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 FHOD1Q9Y613 1164 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 DUSP10Q9Y6W6 482 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 MACROD2A1Z1Q3 448 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 SEC31AO94979 1220 aaKnown RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 EGFRP00533 1210 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 ATP1A1P05023 1023 aaKnown RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 PNMA6AP0CW24 399 aaPredicted RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 PRELPP51888 382 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 KIF5AQ12840 1032 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 BMS1Q14692 1282 aaKnown RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 RINT1Q6NUQ1 792 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 JDP2Q8WYK2 163 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 AGBL1Q96MI9 1066 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 CRACR2AQ9BSW2 395 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 IFIH1Q9BYX4 1025 aaKnown RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 TSGA10Q9BZW7 698 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 TAOK3Q9H2K8 898 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 DEF6Q9H4E7 631 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 NLRC4Q9NPP4 1024 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 HDAC6Q9UBN7 1215 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 FAM184BQ9ULE4 1060 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 ASTN1O14525 1302 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 ZNF536O15090 1300 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 CTAGE15A4D2H0 777 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 PDXKO00764 312 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 ZBTB39O15060 712 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 AKR1B10O60218 316 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 GCNT3O95395 438 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 LCA5LO95447 670 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 ICAM1P05362 532 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 CTAGE8P0CG41 777 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 ARP10275 920 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 POLD1P28340 1107 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 SETQ01105 290 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 APBA1Q02410 837 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 BMT2Q1RMZ1 405 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 DALRD3Q5D0E6 543 aaKnown RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 PAPD7Q5XG87 772 aaKnown RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 CC2D1AQ6P1N0 951 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 ARHGAP27Q6ZUM4 889 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 CTAGE6Q86UF2 777 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 CTAGE4Q8IX94 777 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 SMAP1Q8IYB5 467 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 ZNF577Q9BSK1 485 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 UNC45AQ9H3U1 944 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 ANKZF1Q9H8Y5 726 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 PRDM10Q9NQV6 1147 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 OLFML3Q9NRN5 406 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 PCDHA13Q9Y5I0 950 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 SFI1A8K8P3 1242 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 NFIBO00712 420 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 CALUO43852 315 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 GAP43P17677 238 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 EPS15P42566 896 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 HSD17B4P51659 736 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 POLR2FP61218 127 aaKnown RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 TGFB2P61812 414 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 KCNH2Q12809 1159 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 ASTE1Q2TB18 679 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 HGSNATQ68CP4 663 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 C1orf186Q6ZWK4 172 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 SECISBP2LQ93073 1101 aaKnown RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 HOOK2Q96ED9 719 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 TEPSINQ96N21 525 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 WDR11Q9BZH6 1224 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 NUCKS1Q9H1E3 243 aaKnown RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 DEFB129Q9H1M3 183 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 TYW1Q9NV66 732 aaKnown RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 COL20A1Q9P218 1284 aa9.03□□□□□ -0.96
CPNE4-211ENST00000514439 WRAP73Q9P2S5 460 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-211ENST00000514439 FRMPD4Q14CM0 1322 aa9.02□□□□□ -0.96
CPNE4-211ENST00000514439 SSU72P8A0A1W2PR75 194 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 ANO9A1A5B4 782 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 NFKBIEO00221 500 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 IPO5O00410 1097 aaKnown RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 WDR46O15213 610 aaKnown RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 TLR2O60603 784 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 USO1O60763 962 aaKnown RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 AKAP3O75969 853 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms