RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 ZIC2O95409 532 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-228ENST00000513266 ADAM17P78536 824 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 SHC2P98077 582 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 STXBP2Q15833 593 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 CCDC96Q2M329 555 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 SYDE2Q5VT97 1194 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 KIAA1841Q6NSI8 718 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 TBC1D5Q92609 795 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 CASP10Q92851 521 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 SPATA33Q96N06 139 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 TAAR1Q96RJ0 339 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 STRBPQ96SI9 672 aaKnown RBP11.25□□□□□ -0.61
PTPN20-228ENST00000513266 TUT1Q9H6E5 874 aaKnown RBP11.25□□□□□ -0.61
PTPN20-228ENST00000513266 EPB41L4AQ9HCS5 686 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-228ENST00000513266 PAG1Q9NWQ8 432 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 TMEM260Q9NX78 707 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 WNT16Q9UBV4 365 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 DBR1Q9UK59 544 aaKnown RBP11.25□□□□□ -0.61
PTPN20-228ENST00000513266 MTMR7Q9Y216 660 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 PCDHB12Q9Y5F1 795 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 HCFC2Q9Y5Z7 792 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 MRVI1Q9Y6F6 885 aa11.25□□□□□ -0.61
PTPN20-228ENST00000513266 HELZ2Q9BYK8 2649 aaKnown RBP11.24□□□□□ -0.61
PTPN20-228ENST00000513266 CFHP08603 1231 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 GLULP15104 373 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 RARSP54136 660 aaKnown RBP11.24□□□□□ -0.61
PTPN20-228ENST00000513266 TFAP4Q01664 338 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 MGAT3Q09327 533 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 FBXO47Q5MNV8 452 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 RARS2Q5T160 578 aaKnown RBP11.24□□□□□ -0.61
PTPN20-228ENST00000513266 GIMAP6Q6P9H5 292 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 C12orf76Q8N812 135 aaPredicted RBP11.24□□□□□ -0.61
PTPN20-228ENST00000513266 TCF25Q9BQ70 676 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.24□□□□□ -0.61
PTPN20-228ENST00000513266 AGO3Q9H9G7 860 aaKnown RBP11.24□□□□□ -0.61
PTPN20-228ENST00000513266 KCNK12Q9HB15 430 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 IL1RAPL2Q9NP60 686 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 ZMIZ1Q9ULJ6 1067 aa11.24□□□□□ -0.61
PTPN20-228ENST00000513266 SMG5Q9UPR3 1016 aaKnown RBP11.24□□□□□ -0.61
PTPN20-228ENST00000513266 NMT2O60551 498 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 LGALS2P05162 132 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 CELF3Q5SZQ8 465 aaKnown RBP11.23□□□□□ -0.61
PTPN20-228ENST00000513266 THNSL1Q8IYQ7 743 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 NETO1Q8TDF5 533 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 SYTL5Q8TDW5 730 aaPredicted RBP11.23□□□□□ -0.61
PTPN20-228ENST00000513266 NSUN6Q8TEA1 469 aaKnown RBP11.23□□□□□ -0.61
PTPN20-228ENST00000513266 SECISBP2LQ93073 1101 aaKnown RBP11.23□□□□□ -0.61
PTPN20-228ENST00000513266 IWS1Q96ST2 819 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 C1orf115Q9H7X2 142 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 ENTPD7Q9NQZ7 604 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 CA14Q9ULX7 337 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 STX8Q9UNK0 236 aa11.23□□□□□ -0.61
PTPN20-228ENST00000513266 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.23□□□□□ -0.61
PTPN20-228ENST00000513266 GGPS1O95749 300 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 STAG3L1P0CL83 205 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 TRIM27P14373 513 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 RFX1P22670 979 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 COL4A3Q01955 1670 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 SP2Q02086 613 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 ZNF528Q3MIS6 628 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 ATAT1Q5SQI0 421 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 SPOUT1Q5T280 376 aaKnown RBP11.22□□□□□ -0.61
PTPN20-228ENST00000513266 XRRA1Q6P2D8 792 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 RUFY4Q6ZNE9 571 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 COLGALT1Q8NBJ5 622 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 RGS22Q8NE09 1264 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 WDR19Q8NEZ3 1342 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 DCAF4Q8WV16 495 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 LMBR1Q8WVP7 490 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 MRPS27Q92552 414 aaKnown RBP11.22□□□□□ -0.61
PTPN20-228ENST00000513266 BORCS6Q96GS4 357 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 LZTS1Q9Y250 596 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 EXOC6BQ9Y2D4 811 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 MYH15Q9Y2K3 1946 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
PTPN20-228ENST00000513266 FRMPD2Q68DX3 1309 aaPredicted RBP11.21□□□□□ -0.61
PTPN20-228ENST00000513266 EIF3JO75822 258 aaKnown RBP11.21□□□□□ -0.61
PTPN20-228ENST00000513266 GNAT1P11488 350 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 SCG2P13521 617 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 CD52P31358 61 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 ARHGAP4P98171 946 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 N4BP2L1Q5TBK1 243 aaPredicted RBP11.21□□□□□ -0.61
PTPN20-228ENST00000513266 PHLDB3Q6NSJ2 640 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 RMDN3Q96TC7 470 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 BOLA2Q9H3K6 86 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 BCAS3Q9H6U6 928 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 NGRNQ9NPE2 291 aaKnown RBP11.21□□□□□ -0.61
PTPN20-228ENST00000513266 PNMA2Q9UL42 364 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 PCDHGA2Q9Y5H1 932 aa11.21□□□□□ -0.61
PTPN20-228ENST00000513266 LAMA4Q16363 1823 aa11.21□□□□□ -0.62
PTPN20-228ENST00000513266 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-228ENST00000513266 C1QTNF9BB2RNN3 333 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms