RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 SLFN12Q8IYM2 578 aa18.55■□□□□ 0.56
HMGCL-209ENST00000513148 KAT2BQ92831 832 aa18.55■□□□□ 0.56
HMGCL-209ENST00000513148 LMBRD1Q9NUN5 540 aa18.55■□□□□ 0.56
HMGCL-209ENST00000513148 ALPK3Q96L96 1907 aa18.55■□□□□ 0.56
HMGCL-209ENST00000513148 SCN10AQ9Y5Y9 1956 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 ZSCAN22P10073 491 aaPredicted RBP18.54■□□□□ 0.56
HMGCL-209ENST00000513148 MARK3P27448 753 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 LRRC26Q2I0M4 334 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 FOXD4L6Q3SYB3 417 aaPredicted RBP18.54■□□□□ 0.56
HMGCL-209ENST00000513148 ZNF746Q6NUN9 644 aaPredicted RBP18.54■□□□□ 0.56
HMGCL-209ENST00000513148 FOXD4L3Q6VB84 417 aaPredicted RBP18.54■□□□□ 0.56
HMGCL-209ENST00000513148 SLC39A5Q6ZMH5 540 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 GLG1Q92896 1179 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 C16orf70Q9BSU1 422 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 RBSNQ9H1K0 784 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 BACH1O14867 736 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 F2P00734 622 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 OR52Z1P0C646 297 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 PTGDRQ13258 359 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 ITGA7Q13683 1181 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 KIAA0753Q2KHM9 967 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 MTMR9Q96QG7 549 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 FTOQ9C0B1 505 aaKnown RBP eCLIP18.54■□□□□ 0.56
HMGCL-209ENST00000513148 ZSCAN16Q9H4T2 348 aaPredicted RBP18.54■□□□□ 0.56
HMGCL-209ENST00000513148 TTC12Q9H892 705 aaPredicted RBP18.54■□□□□ 0.56
HMGCL-209ENST00000513148 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.54■□□□□ 0.56
HMGCL-209ENST00000513148 VAV3Q9UKW4 847 aa18.54■□□□□ 0.56
HMGCL-209ENST00000513148 WDR64B1ANS9 1081 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 H3BRB1 525 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 SUPT20HL2P0C7V6 817 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 ORC2Q13416 577 aaPredicted RBP18.53■□□□□ 0.56
HMGCL-209ENST00000513148 MFSD10Q14728 455 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 NBPF20Q3BBV1 942 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 FAM47CQ5HY64 1035 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 NCAPH2Q6IBW4 605 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 MIS18BP1Q6P0N0 1132 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 MIER3Q7Z3K6 550 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 TUT1Q9H6E5 874 aaKnown RBP18.53■□□□□ 0.56
HMGCL-209ENST00000513148 AZI2Q9H6S1 392 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 DISC1Q9NRI5 854 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 PCDHA12Q9UN75 941 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 GRIN2DO15399 1336 aa18.53■□□□□ 0.56
HMGCL-209ENST00000513148 WDR81Q562E7 1941 aa18.52■□□□□ 0.56
HMGCL-209ENST00000513148 F13A1P00488 732 aa18.52■□□□□ 0.56
HMGCL-209ENST00000513148 PSEN2P49810 448 aa18.52■□□□□ 0.56
HMGCL-209ENST00000513148 LRSAM1Q6UWE0 723 aa18.52■□□□□ 0.56
HMGCL-209ENST00000513148 ABHD15Q6UXT9 468 aa18.52■□□□□ 0.56
HMGCL-209ENST00000513148 TRMT1LQ7Z2T5 733 aaKnown RBP18.52■□□□□ 0.56
HMGCL-209ENST00000513148 CCDC60Q8IWA6 550 aaPredicted RBP18.52■□□□□ 0.56
HMGCL-209ENST00000513148 PCYT2Q99447 389 aa18.52■□□□□ 0.56
HMGCL-209ENST00000513148 KATNAL1Q9BW62 490 aa18.52■□□□□ 0.56
HMGCL-209ENST00000513148 ZNF215Q9UL58 517 aaPredicted RBP18.52■□□□□ 0.56
HMGCL-209ENST00000513148 ATP11BQ9Y2G3 1177 aa18.52■□□□□ 0.56
HMGCL-209ENST00000513148 PCDHA10Q9Y5I2 948 aa18.52■□□□□ 0.56
HMGCL-209ENST00000513148 PQBP1O60828 265 aaKnown RBP18.52■□□□□ 0.55
HMGCL-209ENST00000513148 ATG7O95352 703 aa18.52■□□□□ 0.55
HMGCL-209ENST00000513148 PSAPP07602 524 aa18.52■□□□□ 0.55
HMGCL-209ENST00000513148 CEBPZQ03701 1054 aaKnown RBP18.52■□□□□ 0.55
HMGCL-209ENST00000513148 TRIM60Q495X7 471 aa18.52■□□□□ 0.55
HMGCL-209ENST00000513148 SWSAP1Q6NVH7 229 aa18.52■□□□□ 0.55
HMGCL-209ENST00000513148 EMSYQ7Z589 1322 aa18.52■□□□□ 0.55
HMGCL-209ENST00000513148 EML1O00423 815 aa18.51■□□□□ 0.55
HMGCL-209ENST00000513148 PDIA4P13667 645 aaKnown RBP18.51■□□□□ 0.55
HMGCL-209ENST00000513148 SFNP31947 248 aa18.51■□□□□ 0.55
HMGCL-209ENST00000513148 JAK3P52333 1124 aa18.51■□□□□ 0.55
HMGCL-209ENST00000513148 RTP1P59025 263 aa18.51■□□□□ 0.55
HMGCL-209ENST00000513148 PPP2R5CQ13362 524 aa18.51■□□□□ 0.55
HMGCL-209ENST00000513148 C4orf32Q8N8J7 132 aa18.51■□□□□ 0.55
HMGCL-209ENST00000513148 HTATIP2Q9BUP3 242 aa18.51■□□□□ 0.55
HMGCL-209ENST00000513148 SMARCAD1Q9H4L7 1026 aa18.51■□□□□ 0.55
HMGCL-209ENST00000513148 ZNF302Q9NR11 478 aa18.51■□□□□ 0.55
HMGCL-209ENST00000513148 TNRC18O15417 2968 aaPredicted RBP18.51■□□□□ 0.55
HMGCL-209ENST00000513148 MYH9P35579 1960 aaKnown RBP18.51■□□□□ 0.55
HMGCL-209ENST00000513148 POTEMA6NI47 508 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 ARVCFO00192 962 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 TECP42680 631 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 STAT5BP51692 787 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 SF3A1Q15459 793 aaKnown RBP18.5■□□□□ 0.55
HMGCL-209ENST00000513148 B3GNT9Q6UX72 402 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 ERAP1Q9NZ08 941 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 GABBR1Q9UBS5 961 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 CLIC4Q9Y696 253 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 LGR5O75473 907 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 SPIRE1Q08AE8 756 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 FAM160B1Q5W0V3 765 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 PDXDC2PQ6P474 469 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 C7orf31Q8N865 590 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 DPF3Q92784 378 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 RNPEPQ9H4A4 650 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 ZDHHC9Q9Y397 364 aa18.5■□□□□ 0.55
HMGCL-209ENST00000513148 IGKV6D-21A0A0A0MT36 114 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 HAS3O00219 553 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 BRD1O95696 1058 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 UGCGQ16739 394 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 CKAP2LQ8IYA6 745 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 BANK1Q8NDB2 785 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 HDAC6Q9UBN7 1215 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 RGS19P49795 217 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 ATP2C1P98194 919 aaPredicted RBP18.49■□□□□ 0.55
HMGCL-209ENST00000513148 SNX17Q15036 470 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms