RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 SEPT1Q8WYJ6 367 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
CDK7-208ENST00000512687 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 AGO4Q9HCK5 861 aaKnown RBP13.73□□□□□ -0.21
CDK7-208ENST00000512687 SLC9A2Q9UBY0 812 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 A0A0C4DFX4 3053 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 VCANP13611 3396 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 IGLV3-22A0A075B6J6 115 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 RSPH10B2B2RC85 870 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 FAM86B1E9PN63 330 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 MEIS1O00470 390 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 LGR5O75473 907 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 FAM86B2P0C5J1 330 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 RSPH10BP0C881 870 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 IFNAR1P17181 557 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 CEP55Q53EZ4 464 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 PHOSPHO2Q8TCD6 241 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 ZBTB10Q96DT7 871 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 UIMC1Q96RL1 719 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 SLC26A6Q9BXS9 759 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 RNF26Q9BY78 433 aaPredicted RBP13.72□□□□□ -0.21
CDK7-208ENST00000512687 JPH1Q9HDC5 661 aaPredicted RBP13.72□□□□□ -0.21
CDK7-208ENST00000512687 COL4A6Q14031 1691 aa13.72□□□□□ -0.21
CDK7-208ENST00000512687 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.21
CDK7-208ENST00000512687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.71□□□□□ -0.21
CDK7-208ENST00000512687 LCHNA4D1U4 455 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 MAFGO15525 162 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 EDIL3O43854 480 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 KCNJ6P48051 423 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 ACTR2P61160 394 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 TAP1Q03518 808 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 PPFIA1Q13136 1202 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 PLEKHG4Q58EX7 1191 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 MARCH8Q5T0T0 291 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDK7-208ENST00000512687 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
CDK7-208ENST00000512687 DBF4BQ8NFT6 615 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 GAS2L1Q99501 681 aaPredicted RBP13.71□□□□□ -0.21
CDK7-208ENST00000512687 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 GLT8D2Q9H1C3 349 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 CERS4Q9HA82 394 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 PRDM6Q9NQX0 595 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 ERAP1Q9NZ08 941 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 VPS54Q9P1Q0 977 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 CYP46A1Q9Y6A2 500 aa13.71□□□□□ -0.21
CDK7-208ENST00000512687 TTC3P53804 2025 aa13.71□□□□□ -0.22
CDK7-208ENST00000512687 NRCAMQ92823 1304 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 ABHD14A-ACY1A0A1B0GW23 586 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 DDX39AO00148 427 aaKnown RBP13.7□□□□□ -0.22
CDK7-208ENST00000512687 RFXAPO00287 272 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 CAND2O75155 1236 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 CCNE2O96020 404 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 CYP3A4P08684 503 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 GNAT1P11488 350 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 MGAT3Q09327 533 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 GRIK4Q16099 956 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 FAM26DQ5JW98 314 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 NIPA1Q7RTP0 329 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 PLA2G4DQ86XP0 818 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 REXO1Q8N1G1 1221 aaKnown RBP13.7□□□□□ -0.22
CDK7-208ENST00000512687 GLG1Q92896 1179 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 SDF4Q9BRK5 362 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 SMARCAD1Q9H4L7 1026 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 C6orf50Q9HD87 102 aa13.7□□□□□ -0.22
CDK7-208ENST00000512687 ARID2Q68CP9 1835 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 MBLAC1A4D2B0 266 aaPredicted RBP13.69□□□□□ -0.22
CDK7-208ENST00000512687 DLL1O00548 723 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 DHX15O43143 795 aaKnown RBP13.69□□□□□ -0.22
CDK7-208ENST00000512687 TLL1O43897 1013 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 DTNBO60941 627 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 ATG7O95352 703 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 CHRNA1P02708 482 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 IGFBP4P22692 258 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 ZNF76P36508 570 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 IGBP1P78318 339 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 STK3Q13188 491 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 PDAP1Q13442 181 aaKnown RBP13.69□□□□□ -0.22
CDK7-208ENST00000512687 IKBKEQ14164 716 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 PLCB4Q15147 1175 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 ERICH6BQ5W0A0 696 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 CCDC12Q8WUD4 166 aaPredicted RBP13.69□□□□□ -0.22
CDK7-208ENST00000512687 TRAPPC12Q8WVT3 735 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 ZNF274Q96GC6 653 aaPredicted RBP13.69□□□□□ -0.22
CDK7-208ENST00000512687 AIFM3Q96NN9 605 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 TUBE1Q9UJT0 475 aa13.69□□□□□ -0.22
CDK7-208ENST00000512687 FNDC1Q4ZHG4 1894 aaPredicted RBP13.69□□□□□ -0.22
CDK7-208ENST00000512687 IGKV6D-21A0A0A0MT36 114 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 GJB5O95377 273 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 INSRRP14616 1297 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 AKAP17AQ02040 695 aaKnown RBP13.68□□□□□ -0.22
CDK7-208ENST00000512687 KRT40Q6A162 431 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 FAM117BQ6P1L5 589 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 RPAINQ86UA6 219 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 CCDC60Q8IWA6 550 aaPredicted RBP13.68□□□□□ -0.22
CDK7-208ENST00000512687 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 DNAJB3Q8WWF6 145 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 LENG9Q96B70 501 aa13.68□□□□□ -0.22
CDK7-208ENST00000512687 PDRG1Q9NUG6 133 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms