RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 APEX2Q9UBZ4 518 aa3.78□□□□□ -1.8
PVT1-202ENST00000512617 SUSD2Q9UGT4 822 aa3.78□□□□□ -1.8
PVT1-202ENST00000512617 KLHL3Q9UH77 587 aa3.78□□□□□ -1.8
PVT1-202ENST00000512617 ZHX1Q9UKY1 873 aaPredicted RBP3.78□□□□□ -1.8
PVT1-202ENST00000512617 PADI4Q9UM07 663 aa3.78□□□□□ -1.8
PVT1-202ENST00000512617 L1RE1Q9UN81 338 aa3.78□□□□□ -1.8
PVT1-202ENST00000512617 FCF1Q9Y324 198 aaKnown RBP3.78□□□□□ -1.8
PVT1-202ENST00000512617 RRP15Q9Y3B9 282 aaKnown RBP3.78□□□□□ -1.8
PVT1-202ENST00000512617 TRAF6Q9Y4K3 522 aa3.78□□□□□ -1.8
PVT1-202ENST00000512617 PCDHA9Q9Y5H5 950 aa3.78□□□□□ -1.8
PVT1-202ENST00000512617 CORINQ9Y5Q5 1042 aa3.78□□□□□ -1.8
PVT1-202ENST00000512617 SNX13Q9Y5W8 968 aa3.78□□□□□ -1.8
PVT1-202ENST00000512617 SOS1Q07889 1333 aaPredicted RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 SETD1BQ9UPS6 1966 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 A0A1W2PPH5 198 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 CAPN8A6NHC0 703 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 TISP43B9A030 160 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 B9A039 149 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 H7C0S8 307 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 INO80B-WBP1J3KQ70 363 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 PES1O00541 588 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 FFAR2O15552 330 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 B3GALNT1O75752 331 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 TRPA1O75762 1119 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 SASH3O75995 380 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 CAPNS1P04632 268 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 ATP2A2P16615 1042 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 ALOX12P18054 663 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 PLCG1P19174 1290 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 ARNTP27540 789 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 ANP32AP39687 249 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 GRM5P41594 1212 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 SSR1P43307 286 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 KCNJ6P48051 423 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 ADKP55263 362 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 HSD17B7P56937 341 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 UBASH3AP57075 661 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 HMGN5P82970 282 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 GUCY1A3Q02108 690 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 TYRO3Q06418 890 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 SCARB2Q14108 478 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 KRT32Q14532 448 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 MBTPS1Q14703 1052 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 PLCL1Q15111 1095 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 CNN3Q15417 329 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 ASIC2Q16515 512 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 UVSSAQ2YD98 709 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 C4orf17Q53FE4 359 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 ARMC4Q5T2S8 1044 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 BROXQ5VW32 411 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 TDRD10Q5VZ19 366 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 SCARA3Q6AZY7 606 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 ABHD17CQ6PCB6 329 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 APOA5Q6Q788 366 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 NPNTQ6UXI9 565 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 UNC5DQ6UXZ4 953 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 MFSD6Q6ZSS7 791 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 TTLL7Q6ZT98 887 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 CCDC91Q7Z6B0 441 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 ADAT2Q7Z6V5 191 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 MTDHQ86UE4 582 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 LRRTM4Q86VH4 590 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 CCAR2Q8N163 923 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 MICALL1Q8N3F8 863 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 IGSF22Q8N9C0 903 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 BVESQ8NE79 360 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 ANKK1Q8NFD2 765 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 JADE3Q92613 823 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 DPF3Q92784 378 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 FGD4Q96M96 766 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 CDK15Q96Q40 435 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 NCAPGQ9BPX3 1015 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 KIAA1683Q9H0B3 1180 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 MAGEH1Q9H213 219 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 PRDM5Q9NQX1 630 aaPredicted RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 CYP26B1Q9NR63 512 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 PLSCR4Q9NRQ2 329 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 CCM2LQ9NUG4 571 aaPredicted RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 DACT1Q9NYF0 836 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 WDR35Q9P2L0 1181 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 ORC3Q9UBD5 711 aaPredicted RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 B4GALT6Q9UBX8 382 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 HERC5Q9UII4 1024 aaKnown RBP3.77□□□□□ -1.81
PVT1-202ENST00000512617 SMC3Q9UQE7 1217 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 SIK3Q9Y2K2 1263 aa3.77□□□□□ -1.81
PVT1-202ENST00000512617 CARMIL1Q5VZK9 1371 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 MAPKBP1O60336 1514 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 LOC102724428A0A0B4J2F2 783 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 PGPEP1LA6NFU8 196 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 BHMG1C9JSJ3 638 aaPredicted RBP3.76□□□□□ -1.81
PVT1-202ENST00000512617 IPO5O00410 1097 aaKnown RBP3.76□□□□□ -1.81
PVT1-202ENST00000512617 TRAF5O00463 557 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 FYB1O15117 783 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 USO1O60763 962 aaKnown RBP3.76□□□□□ -1.81
PVT1-202ENST00000512617 MMP20O60882 483 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 DNAJA2O60884 412 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 DTNBO60941 627 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 COBLO75128 1261 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 TADA3O75528 432 aa3.76□□□□□ -1.81
PVT1-202ENST00000512617 SOAT2O75908 522 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms