RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 YME1L1Q96TA2 773 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 ZKSCAN3Q9BRR0 538 aa11.97□□□□□ -0.49
PDLIM5-217ENST00000512274 CNTNAP5Q8WYK1 1306 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 NCK2O43639 380 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 TRAK2O60296 914 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 PARNO95453 639 aaKnown RBP11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 U2AF2P26368 475 aaKnown RBP eCLIP11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 TKFCQ3LXA3 575 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 ZNF618Q5T7W0 954 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 ADSSL1Q8N142 457 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 DBF4BQ8NFT6 615 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 TMEM47Q9BQJ4 181 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 ALG1Q9BT22 464 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 SPZ1Q9BXG8 430 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 SH3GLB2Q9NR46 395 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 CFAP45Q9UL16 551 aa11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 NAP1L2Q9ULW6 460 aaPredicted RBP11.96□□□□□ -0.49
PDLIM5-217ENST00000512274 C5orf42Q9H799 3197 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 RBM47A0AV96 593 aaKnown RBP11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 A6NJR5 290 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 hCG_1984214I3L0E3 225 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 GRM6O15303 877 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 LGR5O75473 907 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 TTLL1O95922 423 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 FDX1P10109 184 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 XBP1P17861 261 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 CTNNB1P35222 781 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 NDUFV1P49821 464 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 STAT2P52630 851 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 BAATQ14032 418 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 MBTPS1Q14703 1052 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 MCTP1Q6DN14 999 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 TEX2Q8IWB9 1127 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 ZNF713Q8N859 430 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 ASIC4Q96FT7 647 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 CEP95Q96GE4 821 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 MYL10Q9BUA6 226 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 HDAC6Q9UBN7 1215 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 ADD3Q9UEY8 706 aaKnown RBP11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 MTMR7Q9Y216 660 aa11.95□□□□□ -0.5
PDLIM5-217ENST00000512274 LOC730098B7Z3J9 87 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 NKRFO15226 690 aaKnown RBP eCLIP11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 GALR2O43603 387 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 TXNP10599 105 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 UBE2HP62256 183 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 NBR1Q14596 966 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 ASPRV1Q53RT3 343 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 FRMD5Q7Z6J6 570 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 CHURC1Q8WUH1 139 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 WNT8BQ93098 351 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 RPGRIP1Q96KN7 1286 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 ZNF396Q96N95 335 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 FOXP1Q9H334 677 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 MAD2L2Q9UI95 211 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 CCPG1Q9ULG6 757 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
PDLIM5-217ENST00000512274 ARIH2O95376 493 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 MMP1P03956 469 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 RXRAP19793 462 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 CALML3P27482 149 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 NBL1P41271 181 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 ZNF200P98182 395 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 DNM1Q05193 864 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 PDE4DQ08499 809 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 ADAM15Q13444 863 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 TRIM29Q14134 588 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 PFKFB3Q16875 520 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 GPATCH4Q5T3I0 446 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 TRAF7Q6Q0C0 670 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 KCTD1Q719H9 257 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 FAM160B2Q86V87 743 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 AFG1LQ8WV93 481 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 NKD2Q969F2 451 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 CNTNAP3BQ96NU0 1288 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 SLC26A6Q9BXS9 759 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 CNTNAP3Q9BZ76 1288 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 RCOR1Q9UKL0 485 aa11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 PTPRZ1P23471 2315 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-217ENST00000512274 NFIBO00712 420 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 YEATS4O95619 227 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 NASPP49321 788 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 RBL2Q08999 1139 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 DGLUCYQ7Z3D6 616 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 SRBD1Q8N5C6 995 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 C7orf31Q8N865 590 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 DAGLBQ8NCG7 672 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 GMCL1P1Q8NEA9 526 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 SCFD2Q8WU76 684 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 KAT2BQ92831 832 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 PHKBQ93100 1093 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 TOP1MTQ969P6 601 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 MSLNLQ96KJ4 702 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 PHF20Q9BVI0 1012 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 RIOX1Q9H6W3 641 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 RTEL1Q9NZ71 1219 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 GTF2IRD1Q9UHL9 959 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 STX8Q9UNK0 236 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms