RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 PAGR1Q9BTK6 254 aa8.74□□□□□ -1.01
NEK1-208ENST00000512193 CCSER1Q9C0I3 900 aa8.74□□□□□ -1.01
NEK1-208ENST00000512193 TMEM60Q9H2L4 133 aa8.74□□□□□ -1.01
NEK1-208ENST00000512193 PCDHA6Q9UN73 950 aa8.74□□□□□ -1.01
NEK1-208ENST00000512193 TFR2Q9UP52 801 aa8.74□□□□□ -1.01
NEK1-208ENST00000512193 PCDHA8Q9Y5H6 950 aa8.74□□□□□ -1.01
NEK1-208ENST00000512193 KIDINS220Q9ULH0 1771 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 ARHGAP4P98171 946 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 C10orf76Q5T2E6 689 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 RASGRP2Q7LDG7 609 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 CDAN1Q8IWY9 1227 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 REXO1L1PQ8IX06 675 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 NOA1Q8NC60 698 aaKnown RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 NEK9Q8TD19 979 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 COG1Q8WTW3 980 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 RIN2Q8WYP3 895 aaPredicted RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 VTI1AQ96AJ9 217 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 CCDC97Q96F63 343 aaPredicted RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 CEP170P1Q96L14 293 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 ACCSQ96QU6 501 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 TYW1Q9NV66 732 aaKnown RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 TNS3Q68CZ2 1445 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 CIB2O75838 187 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 NR3C1P04150 777 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 PSMC4P43686 418 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 DR1Q01658 176 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 KCNB1Q14721 858 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 CCDC14Q49A88 953 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 PPP4R3CPQ6ZMV5 832 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 PROM2Q8N271 834 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 ANKRD35Q8N283 1001 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 P3H4Q92791 437 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 CNKSR1Q969H4 720 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 RILPQ96NA2 401 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 KMT5AQ9NQR1 393 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 PCDHB4Q9Y5E5 795 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 MAP2P11137 1827 aaKnown RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 TROVE2P10155 538 aaKnown RBP eCLIP8.73□□□□□ -1.01
NEK1-208ENST00000512193 AKR1B1P15121 316 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 PIK3CAP42336 1068 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 ZNF211Q13398 564 aaPredicted RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 LGSNQ5TDP6 509 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 LMNTD2Q8IXW0 634 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 LRRC1Q9BTT6 524 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 TRIM6Q9C030 488 aaPredicted RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 SEPT9Q9UHD8 586 aaPredicted RBP8.73□□□□□ -1.01
NEK1-208ENST00000512193 KCNG1Q9UIX4 513 aa8.73□□□□□ -1.01
NEK1-208ENST00000512193 I3L4J1 428 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 HIP1RO75146 1068 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 SUN1O94901 812 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 ECEL1O95672 775 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 GBP1P32455 592 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 SLC8A3P57103 927 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 QRICH1Q2TAL8 776 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 TTBK2Q6IQ55 1244 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 COA1Q9GZY4 146 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 RASGRF2O14827 1237 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 TMEM191BP0C7N4 346 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 PEX3P56589 373 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 TNFAIP1Q13829 316 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 SDCCAG8Q86SQ7 713 aaPredicted RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 FOXP4Q8IVH2 680 aaPredicted RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 PROCA1Q8NCQ7 364 aaPredicted RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 ZNF512BQ96KM6 892 aaPredicted RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 C1orf167Q5SNV9 1468 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 GOLGA8SH3BPF8 625 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 CCDC188H7C350 402 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 ACSL3O95573 720 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 GCLMP48507 274 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 BPIFB4P59827 614 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 TROAPQ12815 778 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 COL9A3Q14050 684 aaPredicted RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 HADHQ16836 314 aaKnown RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 MAP7D1Q3KQU3 841 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 HIBCHQ6NVY1 386 aaPredicted RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 ADGRF4Q8IZF3 695 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 RNF10Q8N5U6 811 aaKnown RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 RNF34Q969K3 372 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 TDRD3Q9H7E2 651 aaKnown RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 SMARCAL1Q9NZC9 954 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 TRPC6Q9Y210 931 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 TTLL3Q9Y4R7 772 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 HMGB1P1B2RPK0 211 aaPredicted RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 RPSAP08865 295 aaKnown RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 NT5C2P49902 561 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 TOB1P50616 345 aaPredicted RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 GRM1Q13255 1194 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 TSNAXIP1Q2TAA8 658 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 FAM133BQ5BKY9 247 aaKnown RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 ZNF746Q6NUN9 644 aaPredicted RBP8.72□□□□□ -1.01
NEK1-208ENST00000512193 TMEM206Q9H813 350 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 L2HGDHQ9H9P8 463 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 ANAPC5Q9UJX4 755 aa8.72□□□□□ -1.01
NEK1-208ENST00000512193 RNF8O76064 485 aa8.71□□□□□ -1.01
NEK1-208ENST00000512193 SRGNP10124 158 aa8.71□□□□□ -1.01
NEK1-208ENST00000512193 RASSF2P50749 326 aa8.71□□□□□ -1.01
NEK1-208ENST00000512193 CUL1Q13616 776 aa8.71□□□□□ -1.01
NEK1-208ENST00000512193 KNOP1Q1ED39 458 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms