RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 RASSF8Q8NHQ8 419 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 LARP4BQ92615 738 aaKnown RBP11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 STAMQ92783 540 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 CCDC34Q96HJ3 373 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 CDK5RAP3Q96JB5 506 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 APBA2Q99767 749 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 ZSWIM4Q9H7M6 989 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 DNM3Q9UQ16 869 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 A0A087WWV3 80 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 FSD2A1L4K1 749 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 MYMKA6NI61 221 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 GPR25O00155 361 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 KLRC4O43908 158 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 EYA4O95677 639 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 GGPS1O95749 300 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 SUPT20HL2P0C7V6 817 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 PLA2G4BP0C869 781 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 ZNF865P0CJ78 1059 aaPredicted RBP11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 TXNP10599 105 aaKnown RBP11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 XRCC6P12956 609 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 CYP2B6P20813 491 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 BMP6P22004 513 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 QARSP47897 775 aaKnown RBP11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 C1QTNF8P60827 252 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 PSMC5P62195 406 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 TYRO3Q06418 890 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 MORC3Q14149 939 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 CCL14Q16627 93 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 UGCGQ16739 394 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 SV2BQ7L1I2 683 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 TPH2Q8IWU9 490 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 C4orf19Q8IY42 314 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 BANK1Q8NDB2 785 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 EMID1Q96A84 441 aaPredicted RBP11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 GSDMAQ96QA5 445 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 NACC1Q96RE7 527 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 LXNQ9BS40 222 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 TRIM9Q9C026 710 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 MAN1B1Q9UKM7 699 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 GABRQQ9UN88 632 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 CASP8AP2Q9UKL3 1982 aa11.16□□□□□ -0.62
PDGFRA-209ENST00000512143 CEP350Q5VT06 3117 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 ZBTB39O15060 712 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 SMC2O95347 1197 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 PSAPP07602 524 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 CCDC192P0DO97 292 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 CYP11B2P19099 503 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 ADCYAP1R1P41586 468 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 FLT3LGP49771 235 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 NLRP12P59046 1061 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 AMPD3Q01432 767 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 PRKCZQ05513 592 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 ARHGAP1Q07960 439 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 KCNB1Q14721 858 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 ARSHQ5FYA8 562 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 IQSEC1Q6DN90 963 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 MIS18BP1Q6P0N0 1132 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 SASS6Q6UVJ0 657 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 CCDC60Q8IWA6 550 aaPredicted RBP11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 TRIML1Q8N9V2 468 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 AFAP1L1Q8TED9 768 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 SEPT1Q8WYJ6 367 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 COPS5Q92905 334 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 SMARCE1Q969G3 411 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 DNAJC19Q96DA6 116 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 PCYT2Q99447 389 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 GPR20Q99678 358 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 LRRC27Q9C0I9 530 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 BLZF1Q9H2G9 400 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 TCEAL9Q9UHQ7 104 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 NRBP1Q9UHY1 535 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 DBR1Q9UK59 544 aaKnown RBP11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 SAMM50Q9Y512 469 aa11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 MAFBQ9Y5Q3 323 aaPredicted RBP11.15□□□□□ -0.62
PDGFRA-209ENST00000512143 IGSF9BQ9UPX0 1349 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 MYH9P35579 1960 aaKnown RBP11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 PVALEFA0A1B0GWK0 134 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 NKRFO15226 690 aaKnown RBP eCLIP11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 ADCY6O43306 1168 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 ZNF862O60290 1169 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 LGR5O75473 907 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 GNRH1P01148 92 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 RPN1P04843 607 aaKnown RBP11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 HOXD8P13378 290 aaPredicted RBP11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 SMPD1P17405 629 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 ATP4AP20648 1035 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 CYP2C19P33261 490 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 EHHADHQ08426 723 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 LAMC2Q13753 1193 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 GSE1Q14687 1217 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 KIF22Q14807 665 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 CCDC144BQ3MJ40 725 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 HSDL1Q3SXM5 330 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 PRAMEF19Q5SWL8 479 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 RINT1Q6NUQ1 792 aa11.14□□□□□ -0.63
PDGFRA-209ENST00000512143 SWSAP1Q6NVH7 229 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms