RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 TBX2Q13207 712 aaPredicted RBP10.73□□□□□ -0.69
USP53-207ENST00000510852 CCDC171Q6TFL3 1326 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 KIAA1211Q6ZU35 1233 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 USP33Q8TEY7 942 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 CHAC2Q8WUX2 184 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 USP26Q9BXU7 913 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 LSG1Q9H089 658 aaKnown RBP10.73□□□□□ -0.69
USP53-207ENST00000510852 AASDHPPTQ9NRN7 309 aa10.73□□□□□ -0.69
USP53-207ENST00000510852 MYO5AQ9Y4I1 1855 aaKnown RBP10.73□□□□□ -0.69
USP53-207ENST00000510852 EPN1Q9Y6I3 576 aaPredicted RBP10.73□□□□□ -0.69
USP53-207ENST00000510852 CCDC66A2RUB6 948 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 TULP2O00295 520 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 GPAA1O43292 621 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 APBB3O95704 486 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 CYP17A1P05093 508 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 HARSP12081 509 aaKnown RBP10.72□□□□□ -0.69
USP53-207ENST00000510852 MUTP22033 750 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 LIMK1P53667 647 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 LMNB2Q03252 620 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 TRIM68Q6AZZ1 485 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 FBF1Q8TES7 1133 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 RSRC1Q96IZ7 334 aaKnown RBP10.72□□□□□ -0.69
USP53-207ENST00000510852 KCTD10Q9H3F6 313 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 STARD7Q9NQZ5 370 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 RASSF1Q9NS23 344 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 ETAA1Q9NY74 926 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 LAMP5Q9UJQ1 280 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 DMTF1Q9Y222 760 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 CNPY2Q9Y2B0 182 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 TRIM17Q9Y577 477 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 SCN9AQ15858 1988 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 PSMD14O00487 310 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 KRT13P13646 458 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 MAN2A2P49641 1150 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 GSTO1P78417 241 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 PTH1RQ03431 593 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 DIXDC1Q155Q3 683 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 SPDYCQ5MJ68 293 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 AIDAQ96BJ3 306 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 BARD1Q99728 777 aaKnown RBP10.72□□□□□ -0.69
USP53-207ENST00000510852 PRKD2Q9BZL6 878 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 PSD3Q9NYI0 1048 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 CPSF2Q9P2I0 782 aaKnown RBP10.72□□□□□ -0.69
USP53-207ENST00000510852 NOD1Q9Y239 953 aa10.72□□□□□ -0.69
USP53-207ENST00000510852 NOSIPQ9Y314 301 aaKnown RBP10.72□□□□□ -0.69
USP53-207ENST00000510852 SPTLC1O15269 473 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 CSPG5O95196 566 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 SKOR1P84550 965 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 CXCL9Q07325 125 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 EHHADHQ08426 723 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 GPR162Q16538 588 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 VPS53Q5VIR6 699 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 RSBN1LQ6PCB5 846 aaPredicted RBP10.71□□□□□ -0.69
USP53-207ENST00000510852 TMCO3Q6UWJ1 677 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 CEP57L1Q8IYX8 460 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 PFDN2Q9UHV9 154 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 SLC4A7Q9Y6M7 1214 aa10.71□□□□□ -0.69
USP53-207ENST00000510852 IMPDH2P12268 514 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 LRRC74AQ0VAA2 488 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 TRIM14Q14142 442 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 ARHGEF18Q6ZSZ5 1173 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 SDCCAG8Q86SQ7 713 aaPredicted RBP10.7□□□□□ -0.7
USP53-207ENST00000510852 CCDC65Q8IXS2 484 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 GJA10Q969M2 543 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 CLMNQ96JQ2 1002 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 RHOBTB2Q9BYZ6 727 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 DEF6Q9H4E7 631 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 ARMT1Q9H993 441 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 CXXC1Q9P0U4 656 aaPredicted RBP10.7□□□□□ -0.7
USP53-207ENST00000510852 PDP2Q9P2J9 529 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 GGT7Q9UJ14 662 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 MCM8Q9UJA3 840 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 MYH7P12883 1935 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 MAGEB6P1A0A0J9YX57 407 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 FZD9O00144 591 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 ASMTLO95671 621 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 PAHP00439 452 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 MYBL2P10244 700 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 CA8P35219 290 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 ZNF280AP59817 542 aaPredicted RBP10.7□□□□□ -0.7
USP53-207ENST00000510852 CTDSPL2Q05D32 466 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 BTNL9Q6UXG8 535 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 TMEM110Q86TL2 294 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 LRRC43Q8N309 656 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 LCORLQ8N3X6 602 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 POF1BQ8WVV4 589 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 TBC1D32Q96NH3 1257 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 RIOK1Q9BRS2 568 aaKnown RBP10.7□□□□□ -0.7
USP53-207ENST00000510852 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 SEPT10Q9P0V9 454 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 FNIP2Q9P278 1114 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 FAM184BQ9ULE4 1060 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 PCDHB8Q9UN66 801 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 TTLL3Q9Y4R7 772 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 PCDHB13Q9Y5F0 798 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 MROH7-TTC4A0A0A0MT08 1334 aa10.7□□□□□ -0.7
USP53-207ENST00000510852 FDX1P10109 184 aa10.69□□□□□ -0.7
USP53-207ENST00000510852 HSPD1P10809 573 aaKnown RBP10.69□□□□□ -0.7
USP53-207ENST00000510852 DYNLL1P63167 89 aaKnown RBP10.69□□□□□ -0.7
USP53-207ENST00000510852 CYP4A11Q02928 519 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms