RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 DTX3Q8N9I9 347 aa10.29□□□□□ -0.76
USP53-206ENST00000510737 DNERQ8NFT8 737 aa10.29□□□□□ -0.76
USP53-206ENST00000510737 TTLL11Q8NHH1 800 aa10.29□□□□□ -0.76
USP53-206ENST00000510737 UHRF1BP1Q6BDS2 1440 aa10.29□□□□□ -0.76
USP53-206ENST00000510737 ZFYVE16Q7Z3T8 1539 aa10.28□□□□□ -0.76
USP53-206ENST00000510737 PPP2CBP62714 309 aa10.28□□□□□ -0.76
USP53-206ENST00000510737 PPP2CAP67775 309 aa10.28□□□□□ -0.76
USP53-206ENST00000510737 ARID5AQ03989 594 aa10.28□□□□□ -0.76
USP53-206ENST00000510737 NFATC3Q12968 1075 aa10.28□□□□□ -0.76
USP53-206ENST00000510737 OTOP3Q7RTS5 596 aa10.28□□□□□ -0.76
USP53-206ENST00000510737 WWC2-AS2Q96NR7 200 aa10.28□□□□□ -0.76
USP53-206ENST00000510737 ARHGEF4Q9NR80 690 aa10.28□□□□□ -0.76
USP53-206ENST00000510737 KLHL18O94889 574 aa10.27□□□□□ -0.77
USP53-206ENST00000510737 COL6A2P12110 1019 aa10.27□□□□□ -0.77
USP53-206ENST00000510737 DDR2Q16832 855 aa10.27□□□□□ -0.77
USP53-206ENST00000510737 PLEKHH3Q7Z736 793 aa10.27□□□□□ -0.77
USP53-206ENST00000510737 KLHL36Q8N4N3 616 aa10.27□□□□□ -0.77
USP53-206ENST00000510737 MEGF9Q9H1U4 602 aa10.27□□□□□ -0.77
USP53-206ENST00000510737 FTSJ1Q9UET6 329 aa10.27□□□□□ -0.77
USP53-206ENST00000510737 ZNF335Q9H4Z2 1342 aaPredicted RBP10.27□□□□□ -0.77
USP53-206ENST00000510737 RAPGEF2Q9Y4G8 1499 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 NPEPPSL1A6NEC2 478 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 AGRPO00253 132 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 KRIT1O00522 736 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 NKRFO15226 690 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP53-206ENST00000510737 KLF4O43474 513 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 B4GALT4O60513 344 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 GNL2Q13823 731 aaKnown RBP10.26□□□□□ -0.77
USP53-206ENST00000510737 ANKS3Q6ZW76 656 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 Q8N1X5 172 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 SH3RF3Q8TEJ3 882 aaPredicted RBP10.26□□□□□ -0.77
USP53-206ENST00000510737 OSBP2Q969R2 916 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 EFCAB5A4FU69 1503 aa10.26□□□□□ -0.77
USP53-206ENST00000510737 NCOA1Q15788 1441 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 BLACEA4D250 179 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 CYP7B1O75881 506 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 TUSC3Q13454 348 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 HABP4Q5JVS0 413 aaKnown RBP10.25□□□□□ -0.77
USP53-206ENST00000510737 YOD1Q5VVQ6 348 aaPredicted RBP10.25□□□□□ -0.77
USP53-206ENST00000510737 RSPO2Q6UXX9 243 aaPredicted RBP10.25□□□□□ -0.77
USP53-206ENST00000510737 LBX2Q6XYB7 198 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 SLC16A11Q8NCK7 471 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 WRNIP1Q96S55 665 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 ADAM29Q9UKF5 820 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 ZDHHC9Q9Y397 364 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 TSC22D4Q9Y3Q8 395 aa10.25□□□□□ -0.77
USP53-206ENST00000510737 PRODHO43272 600 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 MAFKO60675 156 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 CKMP06732 381 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 DNAJA1P31689 397 aaKnown RBP10.24□□□□□ -0.77
USP53-206ENST00000510737 ARHGEF18Q6ZSZ5 1173 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 TRIM48Q8IWZ4 208 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 HOMEZQ8IX15 550 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 UHMK1Q8TAS1 419 aaKnown RBP10.24□□□□□ -0.77
USP53-206ENST00000510737 ZNF428Q96B54 188 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 KCNJ15Q99712 375 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 KLC2Q9H0B6 622 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 DLL4Q9NR61 685 aa10.24□□□□□ -0.77
USP53-206ENST00000510737 KNG1P01042 644 aa10.23□□□□□ -0.77
USP53-206ENST00000510737 FAHP16930 419 aa10.23□□□□□ -0.77
USP53-206ENST00000510737 GRK2P25098 689 aa10.23□□□□□ -0.77
USP53-206ENST00000510737 GRK3P35626 688 aa10.23□□□□□ -0.77
USP53-206ENST00000510737 HSP90AA2PQ14568 343 aaPredicted RBP10.23□□□□□ -0.77
USP53-206ENST00000510737 PAN2Q504Q3 1202 aaKnown RBP10.23□□□□□ -0.77
USP53-206ENST00000510737 VASNQ6EMK4 673 aa10.23□□□□□ -0.77
USP53-206ENST00000510737 CIR1Q86X95 450 aaPredicted RBP10.23□□□□□ -0.77
USP53-206ENST00000510737 AARSD1Q9BTE6 412 aaKnown RBP10.23□□□□□ -0.77
USP53-206ENST00000510737 PDGFDQ9GZP0 370 aaPredicted RBP10.23□□□□□ -0.77
USP53-206ENST00000510737 SCAND2PQ9GZW5 306 aaPredicted RBP10.23□□□□□ -0.77
USP53-206ENST00000510737 GOLGA3Q08378 1498 aa10.23□□□□□ -0.77
USP53-206ENST00000510737 FSHBP01225 129 aa10.22□□□□□ -0.77
USP53-206ENST00000510737 R3HDM1Q15032 1099 aaKnown RBP10.22□□□□□ -0.77
USP53-206ENST00000510737 ZNF585AQ6P3V2 769 aa10.22□□□□□ -0.77
USP53-206ENST00000510737 DCAF4Q8WV16 495 aa10.22□□□□□ -0.77
USP53-206ENST00000510737 SGSM3Q96HU1 749 aa10.22□□□□□ -0.77
USP53-206ENST00000510737 RGS17Q9UGC6 210 aaPredicted RBP10.22□□□□□ -0.77
USP53-206ENST00000510737 MAGI2Q86UL8 1455 aa10.22□□□□□ -0.77
USP53-206ENST00000510737 PATE3B3GLJ2 98 aa10.21□□□□□ -0.77
USP53-206ENST00000510737 CNOT4O95628 575 aaKnown RBP10.21□□□□□ -0.77
USP53-206ENST00000510737 FGFR1P11362 822 aa10.21□□□□□ -0.77
USP53-206ENST00000510737 PABPC1P11940 636 aaKnown RBP10.21□□□□□ -0.77
USP53-206ENST00000510737 SKIDA1Q1XH10 827 aa10.21□□□□□ -0.77
USP53-206ENST00000510737 KISS1RQ969F8 398 aaPredicted RBP10.21□□□□□ -0.77
USP53-206ENST00000510737 BARX1Q9HBU1 254 aaPredicted RBP10.21□□□□□ -0.77
USP53-206ENST00000510737 HECW1Q76N89 1606 aa10.21□□□□□ -0.78
USP53-206ENST00000510737 ACOT7O00154 380 aa10.2□□□□□ -0.78
USP53-206ENST00000510737 ATP10AO60312 1499 aa10.2□□□□□ -0.78
USP53-206ENST00000510737 GLRBP48167 497 aa10.2□□□□□ -0.78
USP53-206ENST00000510737 SLFN13Q68D06 897 aa10.2□□□□□ -0.78
USP53-206ENST00000510737 Q6ZUG5 572 aa10.2□□□□□ -0.78
USP53-206ENST00000510737 GMLQ99445 158 aa10.2□□□□□ -0.78
USP53-206ENST00000510737 JADE2Q9NQC1 790 aa10.2□□□□□ -0.78
USP53-206ENST00000510737 KCND1Q9NSA2 647 aa10.2□□□□□ -0.78
USP53-206ENST00000510737 ZFP69BQ9UJL9 534 aa10.2□□□□□ -0.78
USP53-206ENST00000510737 IL18BPO95998 194 aa10.19□□□□□ -0.78
USP53-206ENST00000510737 C6P13671 934 aa10.19□□□□□ -0.78
USP53-206ENST00000510737 PFKPQ01813 784 aa10.19□□□□□ -0.78
USP53-206ENST00000510737 SMAD2Q15796 467 aaKnown RBP10.19□□□□□ -0.78
USP53-206ENST00000510737 KIZQ2M2Z5 673 aa10.19□□□□□ -0.78
USP53-206ENST00000510737 CD276Q5ZPR3 534 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms