RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 UTP6Q9NYH9 597 aaKnown RBP5.35□□□□□ -1.55
NIPBL-206ENST00000509429 TMCC3Q9ULS5 477 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 EEA1Q15075 1411 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 PRR36Q9H6K5 1346 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 MASP2O00187 686 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 CHL1O00533 1208 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 FOXS1O43638 330 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 HTATSF1O43719 755 aaKnown RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 RPN1P04843 607 aaKnown RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 TPM2P07951 284 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 PDGFRBP09619 1106 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 C1SP09871 688 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 CCDC175P0C221 793 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 U2AF1L5P0DN76 240 aaPredicted RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 RBP3P10745 1247 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 ZNF28P17035 718 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 CTGFP29279 349 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 GNALP38405 381 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 U2AF1Q01081 240 aaKnown RBP eCLIP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 FAM160A1Q05DH4 1040 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 RAD51AP2Q09MP3 1159 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 SIM2Q14190 667 aaPredicted RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 VPS72Q15906 364 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 ODR4Q5SWX8 454 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 SOGA3Q5TF21 947 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 MFSD4BQ5TF39 518 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 FNDC7Q5VTL7 733 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 PRAMEF18Q5VWM3 479 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 PDXDC1Q6P996 788 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 MYO1HQ8N1T3 1032 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 CACTINQ8WUQ7 758 aaKnown RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 JARID2Q92833 1246 aaPredicted RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 SMARCC1Q92922 1105 aaPredicted RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 ERP27Q96DN0 273 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 CDHR1Q96JP9 859 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 PLEKHG4BQ96PX9 1271 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 AS3MTQ9HBK9 375 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 TYW1Q9NV66 732 aaKnown RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 CHCHD3Q9NX63 227 aaKnown RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 PTGFRNQ9P2B2 879 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 FAM8A1Q9UBU6 413 aa5.34□□□□□ -1.55
NIPBL-206ENST00000509429 THRAP3Q9Y2W1 955 aaKnown RBP5.34□□□□□ -1.55
NIPBL-206ENST00000509429 WIZO95785 1651 aa5.34□□□□□ -1.56
NIPBL-206ENST00000509429 MROH2BQ7Z745 1585 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 PLIN1O60240 522 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 UBOX5O94941 541 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 TPM3P06753 285 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 GSTM1P09488 218 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 USP17L7P0C7H9 530 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 RPL17P18621 184 aaKnown RBP5.33□□□□□ -1.56
NIPBL-206ENST00000509429 ATP2B1P20020 1258 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 GTF2F1P35269 517 aaKnown RBP eCLIP5.33□□□□□ -1.56
NIPBL-206ENST00000509429 ADRA1BP35368 520 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 C21orf58P58505 322 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 RAPGEF1Q13905 1077 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 CCDC93Q567U6 631 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 CRTC3Q6UUV7 619 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 STK32CQ86UX6 486 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 C1orf210Q8IVY1 113 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 CHPFQ8IZ52 775 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 CCDC89Q8N998 374 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 NETO2Q8NC67 525 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 PDGFDQ9GZP0 370 aaPredicted RBP5.33□□□□□ -1.56
NIPBL-206ENST00000509429 POLG2Q9UHN1 485 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 ZNF652Q9Y2D9 606 aa5.33□□□□□ -1.56
NIPBL-206ENST00000509429 MRPL42Q9Y6G3 142 aaKnown RBP5.33□□□□□ -1.56
NIPBL-206ENST00000509429 CCDC163A0A0D9SF12 145 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 DYTNA2CJ06 578 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 ANKRD33BA6NCL7 494 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 ERICH4A6NGS2 130 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 DNAJC6O75061 913 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 SKILP12757 684 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 ITGA1P56199 1179 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 TMEM95Q3KNT9 176 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 DIEXFQ68CQ4 756 aaKnown RBP5.32□□□□□ -1.56
NIPBL-206ENST00000509429 TCTN3Q6NUS6 607 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 FBXO33Q7Z6M2 555 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 PMFBP1Q8TBY8 1022 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 FBF1Q8TES7 1133 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 ZNF483Q8TF39 744 aaPredicted RBP5.32□□□□□ -1.56
NIPBL-206ENST00000509429 TSPYL1Q9H0U9 437 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 DONSONQ9NYP3 566 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 CLIC5Q9NZA1 410 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 ZHX1Q9UKY1 873 aaPredicted RBP5.32□□□□□ -1.56
NIPBL-206ENST00000509429 MAFFQ9ULX9 164 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 RAD54L2Q9Y4B4 1467 aa5.32□□□□□ -1.56
NIPBL-206ENST00000509429 SMARCA4P51532 1647 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 KIF16BQ96L93 1317 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 A0A1W2PRQ8 180 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 TBX3O15119 743 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 HNRNPCP07910 306 aaKnown RBP eCLIP5.31□□□□□ -1.56
NIPBL-206ENST00000509429 CCDC159P0C7I6 412 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 TSPAN7P41732 249 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 PIK3CAP42336 1068 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 TRAPPC10P48553 1259 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 SERPINB4P48594 390 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 ZNF131P52739 623 aa5.31□□□□□ -1.56
NIPBL-206ENST00000509429 TMED1Q13445 227 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms