RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 GJA10Q969M2 543 aa14.31□□□□□ -0.12
CAST-223ENST00000508608 MBOAT7Q96N66 472 aa14.31□□□□□ -0.12
CAST-223ENST00000508608 MXD3Q9BW11 206 aa14.31□□□□□ -0.12
CAST-223ENST00000508608 ANO3Q9BYT9 981 aa14.31□□□□□ -0.12
CAST-223ENST00000508608 ZHX3Q9H4I2 956 aa14.31□□□□□ -0.12
CAST-223ENST00000508608 TRAF3IP3Q9Y228 551 aa14.31□□□□□ -0.12
CAST-223ENST00000508608 NPHP3-ACAD11A0A0J9YXS1 232 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 FLOT1O75955 427 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 SLC16A2P36021 539 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 CUL1Q13616 776 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 EMC10Q5UCC4 262 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 VPS36Q86VN1 386 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 CALR3Q96L12 384 aaKnown RBP14.3□□□□□ -0.12
CAST-223ENST00000508608 PACSIN1Q9BY11 444 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 TAF1DQ9H5J8 278 aaPredicted RBP14.3□□□□□ -0.12
CAST-223ENST00000508608 POLLQ9UGP5 575 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 TMEM59LQ9UK28 342 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 FAM169AQ9Y6X4 670 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 ESYT3A0FGR9 886 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 HMGB1P1B2RPK0 211 aaPredicted RBP14.3□□□□□ -0.12
CAST-223ENST00000508608 C6orf229H3BNL8 230 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 TBX3O15119 743 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 KIF4AO95239 1232 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 KRT14P02533 472 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 FAM153BP0C7A2 387 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 MYBP10242 640 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 XRCC5P13010 732 aaKnown RBP14.3□□□□□ -0.12
CAST-223ENST00000508608 SHMT1P34896 483 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 GTF2IP78347 998 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
CAST-223ENST00000508608 PTK2Q05397 1052 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 EXOC3L4Q17RC7 722 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 SKIDA1Q1XH10 827 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 FAM153CQ494X1 144 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 KCTD1Q719H9 257 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 CCDC17Q96LX7 622 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 FAM153AQ9UHL3 310 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
CAST-223ENST00000508608 ZSCAN5CA6NGD5 496 aaPredicted RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 GOLGA6L10A6NI86 522 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 ZNF233A6NK53 670 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 MPHOSPH10O00566 681 aaKnown RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 PDXKO00764 312 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 NDUFAB1O14561 156 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 KCNK3O14649 394 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 RAD51CO43502 376 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 MED24O75448 989 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 UCHL3P15374 230 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 HSPA9P38646 679 aaKnown RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 PRKCIP41743 596 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 ENOX2Q16206 610 aaKnown RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 KNOP1Q1ED39 458 aaKnown RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 PACS2Q86VP3 889 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 ACTRT1Q8TDG2 376 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 LMBR1Q8WVP7 490 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 ISCUQ9H1K1 167 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 METTL14Q9HCE5 456 aaKnown RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 FBXL5Q9UKA1 691 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 PACSIN2Q9UNF0 486 aaPredicted RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 DNM3Q9UQ16 869 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 UBR3Q6ZT12 1888 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 POTEFA5A3E0 1075 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 SLC16A3O15427 465 aaKnown RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 NR1D1P20393 614 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 RPL13P26373 211 aaKnown RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 GUCY2FP51841 1108 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 PDCLQ13371 301 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 ARSHQ5FYA8 562 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 POTEGQ6S5H5 508 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 POTEEQ6S8J3 1075 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 LRIG3Q6UXM1 1119 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 FAM196AQ6ZSG2 479 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 IRF2BP2Q7Z5L9 587 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 ATP6V1G3Q96LB4 118 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 COA1Q9GZY4 146 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 KANSL2Q9H9L4 492 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 DDX4Q9NQI0 724 aaKnown RBP14.29□□□□□ -0.12
CAST-223ENST00000508608 PCDHA1Q9Y5I3 950 aa14.29□□□□□ -0.12
CAST-223ENST00000508608 SRRM3A6NNA2 597 aaPredicted RBP14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L15C9J2P7 530 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L13C9JLJ4 530 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L11C9JVI0 530 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L18D6R9N7 530 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L22D6RA61 530 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L17D6RBQ6 530 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L19D6RCP7 530 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L20D6RJB6 530 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 ANKRD65E5RJM6 399 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 PGRMC1O00264 195 aaKnown RBP14.28□□□□□ -0.12
CAST-223ENST00000508608 ERLIN2O94905 339 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 HOXA10P31260 410 aaPredicted RBP14.28□□□□□ -0.12
CAST-223ENST00000508608 NOP2P46087 812 aaKnown RBP14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L24Q0WX57 530 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 QRICH1Q2TAL8 776 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 KCTD16Q68DU8 428 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 USP17L6PQ6QN14 398 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 ZNF571Q7Z3V5 609 aaPredicted RBP14.28□□□□□ -0.12
CAST-223ENST00000508608 DCAF4Q8WV16 495 aa14.28□□□□□ -0.12
CAST-223ENST00000508608 LRRC45Q96CN5 670 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms