RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 TRIM61Q5EBN2 209 aa7.07□□□□□ -1.28
UBE2D3-225ENST00000508476 ERICH6BQ5W0A0 696 aa7.07□□□□□ -1.28
UBE2D3-225ENST00000508476 ABHD17CQ6PCB6 329 aa7.07□□□□□ -1.28
UBE2D3-225ENST00000508476 BORAQ6PGQ7 559 aa7.07□□□□□ -1.28
UBE2D3-225ENST00000508476 FAM124AQ86V42 546 aa7.07□□□□□ -1.28
UBE2D3-225ENST00000508476 NLGN4XQ8N0W4 816 aa7.07□□□□□ -1.28
UBE2D3-225ENST00000508476 RBM15Q96T37 977 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBE2D3-225ENST00000508476 SFMBT1Q9UHJ3 866 aa7.07□□□□□ -1.28
UBE2D3-225ENST00000508476 FBXO21O94952 628 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 PLATP00750 562 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 ITGB3P05106 788 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 NAT1P18440 290 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 NFKB2Q00653 900 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 EFEMP1Q12805 493 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 FAM47CQ5HY64 1035 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 FIGNQ5HY92 759 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 CPZQ66K79 652 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 ZDHHC9Q9Y397 364 aa7.06□□□□□ -1.28
UBE2D3-225ENST00000508476 TCRBV16S1A1N1A0A5B0 115 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 K7ESM1 405 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 EFCAB14O75071 495 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 RAPGEF3O95398 923 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 C4BPAP04003 597 aaKnown RBP7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 KCNA6P17658 529 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 LACTBP83111 547 aaPredicted RBP7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 NFATC3Q12968 1075 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 SQSTM1Q13501 440 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 PKN3Q6P5Z2 889 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 LIMS2Q7Z4I7 341 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 KBTBD2Q8IY47 623 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 IGDCC4Q8TDY8 1250 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 MAGEB10Q96LZ2 347 aaPredicted RBP7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 MRPL4Q9BYD3 311 aaKnown RBP7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 NCOA5Q9HCD5 579 aaKnown RBP7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 TRIM39Q9HCM9 518 aa7.05□□□□□ -1.28
UBE2D3-225ENST00000508476 PRAMEF25A6NGN4 478 aa7.04□□□□□ -1.28
UBE2D3-225ENST00000508476 MC4RP32245 332 aa7.04□□□□□ -1.28
UBE2D3-225ENST00000508476 NOSTRINQ8IVI9 506 aa7.04□□□□□ -1.28
UBE2D3-225ENST00000508476 KLHL36Q8N4N3 616 aa7.04□□□□□ -1.28
UBE2D3-225ENST00000508476 CLUHP3Q96NS8 147 aa7.04□□□□□ -1.28
UBE2D3-225ENST00000508476 PTPN18Q99952 460 aa7.04□□□□□ -1.28
UBE2D3-225ENST00000508476 SSBP3Q9BWW4 388 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-225ENST00000508476 ZSWIM4Q9H7M6 989 aa7.04□□□□□ -1.28
UBE2D3-225ENST00000508476 ZNF536O15090 1300 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 SCDO00767 359 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 GSTA4O15217 222 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 B4GALT4O60513 344 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 CCDC144BQ3MJ40 725 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 HHIPL2Q6UWX4 724 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 EP400NLQ6ZTU2 488 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 Q6ZUG5 572 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 OVCH1Q7RTY7 1134 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 GPR155Q7Z3F1 870 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 CELF4Q9BZC1 486 aaKnown RBP7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 BARX1Q9HBU1 254 aaPredicted RBP7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 PPP4R1LQ9P1A2 415 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 BTBD7Q9P203 1132 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 ARHGAP28Q9P2N2 729 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 ADAM29Q9UKF5 820 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 PTPN22Q9Y2R2 807 aa7.03□□□□□ -1.28
UBE2D3-225ENST00000508476 LAMTOR5O43504 91 aa7.02□□□□□ -1.29
UBE2D3-225ENST00000508476 KCNQ2O43526 872 aa7.02□□□□□ -1.29
UBE2D3-225ENST00000508476 CLASP2O75122 1294 aaKnown RBP7.02□□□□□ -1.29
UBE2D3-225ENST00000508476 GJA4P35212 333 aa7.02□□□□□ -1.29
UBE2D3-225ENST00000508476 NFE2L2Q16236 605 aa7.02□□□□□ -1.29
UBE2D3-225ENST00000508476 IGSF22Q8N9C0 903 aa7.02□□□□□ -1.29
UBE2D3-225ENST00000508476 DRC1Q96MC2 740 aa7.02□□□□□ -1.29
UBE2D3-225ENST00000508476 PIF1Q9H611 641 aa7.02□□□□□ -1.29
UBE2D3-225ENST00000508476 CCDC163A0A0D9SF12 145 aa7.01□□□□□ -1.29
UBE2D3-225ENST00000508476 H0Y858 1186 aa7.01□□□□□ -1.29
UBE2D3-225ENST00000508476 CHGBP05060 677 aa7.01□□□□□ -1.29
UBE2D3-225ENST00000508476 MMEP08473 750 aa7.01□□□□□ -1.29
UBE2D3-225ENST00000508476 PTGS1P23219 599 aa7.01□□□□□ -1.29
UBE2D3-225ENST00000508476 AOAHP28039 575 aa7.01□□□□□ -1.29
UBE2D3-225ENST00000508476 SPATS1Q496A3 300 aa7.01□□□□□ -1.29
UBE2D3-225ENST00000508476 MRFAP1L1Q96HT8 127 aa7.01□□□□□ -1.29
UBE2D3-225ENST00000508476 ESYT3A0FGR9 886 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 RASSF10A6NK89 507 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 PLD2O14939 933 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 PPP1R12AO14974 1030 aaPredicted RBP7□□□□□ -1.29
UBE2D3-225ENST00000508476 MPIG6BO95866 241 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 ZNF888P0CJ79 500 aaPredicted RBP7□□□□□ -1.29
UBE2D3-225ENST00000508476 CSF2RBP32927 897 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 TMEM177Q53S58 311 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 LRSAM1Q6UWE0 723 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 SH3TC2Q8TF17 1288 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 AJUBAQ96IF1 538 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 LOXL4Q96JB6 756 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 UCKL1Q9NWZ5 548 aa7□□□□□ -1.29
UBE2D3-225ENST00000508476 ADRB1P08588 477 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 PPP2CBP62714 309 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 PPP2CAP67775 309 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 IL13RA1P78552 427 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 ZNF460Q14592 562 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 ZNF827Q17R98 1081 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 ARHGEF18Q6ZSZ5 1173 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 PLEKHH3Q7Z736 793 aa6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 RALYLQ86SE5 291 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-225ENST00000508476 UBXN4Q92575 508 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms