RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.63	□□□□□ -0.71
UBE2D3-223	ENST00000508249	PALM3	A6NDB9	673 aa	Predicted RBP	10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	CCDC69	A6NI79	296 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	GALR2	O43603	387 aa	Predicted RBP	10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ICAM3	P32942	547 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	NDUFV1	P49821	464 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ANTXR2	P58335	489 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SP2	Q02086	613 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	TROAP	Q12815	778 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	PTPN21	Q16825	1174 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	USH1G	Q495M9	461 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MYSM1	Q5VVJ2	828 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SYNE3	Q6ZMZ3	975 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	DHX32	Q7L7V1	743 aa	Known RBP	10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SGMS1	Q86VZ5	419 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	FIBCD1	Q8N539	461 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SAMD3	Q8N6K7	520 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	EFHB	Q8N7U6	833 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	TMEM105	Q8N8V8	129 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SEPT8	Q92599	483 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MPHOSPH6	Q99547	160 aa	Known RBP	10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	IGFLR1	Q9H665	355 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	BCAS3	Q9H6U6	928 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	LY9	Q9HBG7	655 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	PLAGL2	Q9UPG8	496 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	FANCM	Q8IYD8	2048 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	KAT6A	Q92794	2004 aa		10.62	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ABCB11	O95342	1321 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MED19	A0JLT2	244 aa	Predicted RBP	10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249		B4DLN1	442 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	KLRF2	D3W0D1	207 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ITGB1	P05556	798 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SMIM10L2A	P0DMW4	78 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SMIM10L2B	P0DMW5	78 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MRPL12	P52815	198 aa	Known RBP	10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	CDC37	Q16543	378 aa	Predicted RBP	10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	FAM26D	Q5JW98	314 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	NFXL1	Q6ZNB6	911 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MCF2L2	Q86YR7	1114 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ZNF654	Q8IZM8	581 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	FBXL16	Q8N461	479 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	IL31RA	Q8NI17	732 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	IL17RA	Q96F46	866 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	PHF7	Q9BWX1	381 aa	Predicted RBP	10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MAP3K20	Q9NYL2	800 aa	Known RBP	10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MAD2L2	Q9UI95	211 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	TRPC6	Q9Y210	931 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MRPL11	Q9Y3B7	192 aa	Known RBP	10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	TELO2	Q9Y4R8	837 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SLC12A7	Q9Y666	1083 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MRPL42	Q9Y6G3	142 aa	Known RBP	10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	TAF6L	Q9Y6J9	622 aa		10.61	□□□□□ -0.71
UBE2D3-223	ENST00000508249	CEP250	Q9BV73	2442 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	DHX16	O60231	1041 aa	Known RBP	10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SORBS3	O60504	671 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	CAND2	O75155	1236 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	CHRNA1	P02708	482 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	GOLGA8H	P0CJ92	632 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	EIF2AK2	P19525	551 aa	Known RBP	10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	UBA1	P22314	1058 aa	Known RBP	10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	GHRHR	Q02643	423 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MGAT3	Q09327	533 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	LAMC2	Q13753	1193 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	KCNC3	Q14003	757 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	CELF3	Q5SZQ8	465 aa	Known RBP	10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	BLOC1S2	Q6QNY1	142 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	TEX2	Q8IWB9	1127 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	DHX37	Q8IY37	1157 aa	Known RBP	10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ADGRF4	Q8IZF3	695 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SPPL3	Q8TCT6	385 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	NSUN6	Q8TEA1	469 aa	Known RBP	10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ATP8B4	Q8TF62	1192 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ATP6V0A1	Q93050	837 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	P2RX5	Q93086	422 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	MTMR8	Q96EF0	704 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	IWS1	Q96ST2	819 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	RMDN3	Q96TC7	470 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	AMN	Q9BXJ7	453 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	SMOC2	Q9H3U7	446 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	RNPEP	Q9H4A4	650 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	RIOX1	Q9H6W3	641 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	EHMT1	Q9H9B1	1298 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	PXMP2	Q9NR77	195 aa		10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	RBM28	Q9NW13	759 aa	Known RBP	10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	EP300	Q09472	2414 aa	Predicted RBP	10.6	□□□□□ -0.71
UBE2D3-223	ENST00000508249	C17orf102	A2RUQ5	167 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ZBTB5	O15062	677 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	PPFIA4	O75335	1185 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	DGKI	O75912	1065 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	LGALS2	P05162	132 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ATF7	P17544	494 aa	Predicted RBP	10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ID4	P47928	161 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	NRIP1	P48552	1158 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	NUBP1	P53384	320 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	ANAPC15	P60006	121 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	FGD1	P98174	961 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	EXOSC10	Q01780	885 aa	Known RBP	10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	STXBP2	Q15833	593 aa		10.59	□□□□□ -0.71
UBE2D3-223	ENST00000508249	QRICH1	Q2TAL8	776 aa		10.59	□□□□□ -0.71

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