RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 MRPL44Q9H9J2 332 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 LZTS1Q9Y250 596 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 ABCC6O95255 1503 aa11.71□□□□□ -0.53
PDLIM5-210ENST00000508216 ADGRL2O95490 1459 aa11.71□□□□□ -0.53
PDLIM5-210ENST00000508216 DAPK1P53355 1430 aa11.71□□□□□ -0.53
PDLIM5-210ENST00000508216 SIGLEC16A6NMB1 481 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 ATP5DP30049 168 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 CSTF2P33240 577 aaKnown RBP eCLIP11.71□□□□□ -0.542e-6■■□□□ 13.9
PDLIM5-210ENST00000508216 MSH2P43246 934 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 THOP1P52888 689 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 NCALDP61601 193 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 NR1D2Q14995 579 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 R3HDM1Q15032 1099 aaKnown RBP11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 PARP6Q2NL67 630 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 GALNTL6Q49A17 601 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 TRIM68Q6AZZ1 485 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 CCDC62Q6P9F0 684 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 LRIG3Q6UXM1 1119 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 TOGARAM2Q6ZUX3 1019 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 KRT27Q7Z3Y8 459 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 PALB2Q86YC2 1186 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 SIRT2Q8IXJ6 389 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 ZBED8Q8IZ13 594 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 CHCHD4Q8N4Q1 142 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 TC2NQ8N9U0 490 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 ENGASEQ8NFI3 743 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 GSDMBQ8TAX9 411 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 ATL1Q8WXF7 558 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 ZNF333Q96JL9 665 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 CDHR1Q96JP9 859 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 B3GNT4Q9C0J1 378 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 ANO2Q9NQ90 1003 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 ETNK2Q9NVF9 386 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 SEC63Q9UGP8 760 aaKnown RBP11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 LNPEPQ9UIQ6 1025 aa11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 ZNF777Q9ULD5 760 aaPredicted RBP11.71□□□□□ -0.54
PDLIM5-210ENST00000508216 AKR1B15C9JRZ8 316 aaPredicted RBP11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 FBP2O00757 339 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 ORC4O43929 436 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 DRD4P21917 467 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 TMOD1P28289 359 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 GJB2P29033 226 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 TMED10P49755 219 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 CDK7P50613 346 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 GJA9P57773 515 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 PPP2R5BQ15173 497 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 ZCWPW2Q504Y3 356 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 CCDC102BQ68D86 513 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 ASRGL1Q7L266 308 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 OSTM1Q86WC4 334 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 CARNMT1Q8N4J0 409 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 NAT14Q8WUY8 206 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 SSH1Q8WYL5 1049 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 SGCDQ92629 289 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 UROC1Q96N76 676 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 RAB3IPQ96QF0 476 aaPredicted RBP11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 RAB17Q9H0T7 212 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 DDX43Q9NXZ2 648 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 RASAL2Q9UJF2 1139 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 PALD1Q9ULE6 856 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 MKL2Q9ULH7 1088 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 HBS1LQ9Y450 684 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 MAST1Q9Y2H9 1570 aa11.7□□□□□ -0.54
PDLIM5-210ENST00000508216 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TMEM114B3SHH9 223 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 H0YC42 278 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PSMD14O00487 310 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 SPTLC1O15269 473 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 ECE2O60344 883 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 ALDH1L1O75891 902 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TPBGLP0DKB5 382 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 VAV1P15498 845 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 M6PRP20645 277 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 KCNA3P22001 575 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 HMOX2P30519 316 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TXKP42681 527 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TPD52P55327 224 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PAPD7Q5XG87 772 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PPP2R2DQ66LE6 453 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 DENND2CQ68D51 928 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TUBA3EQ6PEY2 450 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 DBX2Q6ZNG2 339 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 ZNF662Q6ZS27 426 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PPP1R42Q7Z4L9 355 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PIGWQ7Z7B1 504 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TBC1D1Q86TI0 1168 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 OR7G1Q8NGA0 311 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PLEKHO2Q8TD55 490 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 GAB3Q8WWW8 586 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 GIMAP5Q96F15 307 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 C1orf74Q96LT6 269 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TSKSQ9UJT2 592 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 IQGAP1P46940 1657 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 IQANK1A0A1B0GTG1 560 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 TRPA1O75762 1119 aa11.69□□□□□ -0.54
PDLIM5-210ENST00000508216 PDE5AO76074 875 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms