RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ZIM3Q96PE6 472 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 SPZ1Q9BXG8 430 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 TLR10Q9BXR5 811 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 TANGO6Q9C0B7 1094 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 ANKRD2Q9GZV1 360 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZMYND12Q9H0C1 365 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 ISCUQ9H1K1 167 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 PLEKHA4Q9H4M7 779 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 TAF1DQ9H5J8 278 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLITRK6Q9H5Y7 841 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 VCPKMTQ9H867 229 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 MLXIPQ9HAP2 919 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 EPB41L5Q9HCM4 733 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM207AQ9NSI2 230 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 BSDC1Q9NW68 430 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 ARHGAP20Q9P2F6 1191 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 ATP6V0A2Q9Y487 856 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 PCDHGC5Q9Y5F6 944 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 CAPN6Q9Y6Q1 641 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 BCL9O00512 1426 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 CASZ1Q86V15 1759 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ROBO3Q96MS0 1386 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 GMNCA6NCL1 334 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 RASSF10A6NK89 507 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 STXBP3O00186 592 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 LCE2BO14633 110 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZNF263O14978 683 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCNT1O60563 726 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 GFPT2O94808 682 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 BAG3O95817 575 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 LDHCP07864 332 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 GHRP10912 638 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 EZRP15311 586 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 CALRP27797 417 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 GBP1P32455 592 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 NF2P35240 595 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC1A4P43007 532 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 FNTAP49354 379 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 NAPAP54920 295 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 DYNLL1P63167 89 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC7A5Q01650 507 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 RASSF7Q02833 373 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 STK4Q13043 487 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ITGB3BPQ13352 177 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 PDCLQ13371 301 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 HLTFQ14527 1009 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 RPS6KA1Q15418 735 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 SNCBQ16143 134 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ASIC2Q16515 512 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC18A3Q16572 532 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 TXNRD1Q16881 649 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 SKIDA1Q1XH10 827 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ASTE1Q2TB18 679 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 CEP85LQ5SZL2 805 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 MEI1Q5TIA1 1274 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 KLHDC7AQ5VTJ3 777 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 SUSD4Q5VX71 490 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 KRT79Q5XKE5 535 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ADGRA1Q86SQ6 560 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 HOOK3Q86VS8 718 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 MYOCDQ8IZQ8 938 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZNF444Q8N0Y2 327 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 REXO1Q8N1G1 1221 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ANKS4BQ8N8V4 417 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 TSEN2Q8NCE0 465 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 MYCBPAPQ8TBZ2 947 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ACTRT1Q8TDG2 376 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 IFT81Q8WYA0 676 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 BAP1Q92560 729 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 LARP4BQ92615 738 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ARL8AQ96BM9 186 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 NSUN4Q96CB9 384 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC114Q96M63 670 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCT8L2Q96SF2 557 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 NAP1L3Q99457 506 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 CDCA7Q9BWT1 371 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 NT5C3AQ9H0P0 336 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 STMN4Q9H169 189 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 CXorf56Q9H5V9 222 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 MKNK2Q9HBH9 465 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 TMBIM4Q9HC24 238 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 DCP1AQ9NPI6 582 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM114A2Q9NRY5 505 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 KLC4Q9NSK0 619 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 RBM12Q9NTZ6 932 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC87Q9NVE4 849 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 INTUQ9ULD6 942 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 NFU1Q9UMS0 254 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 PLAAQ9Y263 795 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZBTB1Q9Y2K1 713 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 DIS3Q9Y2L1 958 aaKnown RBP5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 COL4A3BPQ9Y5P4 624 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 DUSP10Q9Y6W6 482 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 FLT1P17948 1338 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM205AQ6ZU69 1335 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 KDM3AQ9Y4C1 1321 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 NUP98P52948 1817 aa5.44□□□□□ -1.54
HMGB3P16-201ENST00000508037 SHANK3Q9BYB0 1731 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 LAMB1P07942 1786 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 LAMB2P55268 1798 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms