RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CTAGE6Q86UF2 777 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 CTAGE4Q8IX94 777 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 CCDC170Q8IYT3 715 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 HNRNPLLQ8WVV9 542 aaKnown RBP15.99■□□□□ 0.15
DDX41-208ENST00000507955 DYDC2Q96IM9 177 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 PDE11AQ9HCR9 933 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 MYO1AQ9UBC5 1043 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.99■□□□□ 0.15
DDX41-208ENST00000507955 TNS1Q9HBL0 1735 aaKnown RBP15.99■□□□□ 0.15
DDX41-208ENST00000507955 ZMYND10O75800 440 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 FOSP01100 380 aaPredicted RBP15.99■□□□□ 0.15
DDX41-208ENST00000507955 ARP10275 920 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 CASP4P49662 377 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 MRPS25P82663 173 aaKnown RBP15.99■□□□□ 0.15
DDX41-208ENST00000507955 KIF5AQ12840 1032 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 SPA17Q15506 151 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 ZC2HC1CQ53FD0 456 aaPredicted RBP15.99■□□□□ 0.15
DDX41-208ENST00000507955 TDRD12Q587J7 1177 aaKnown RBP15.99■□□□□ 0.15
DDX41-208ENST00000507955 MOXD1Q6UVY6 613 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 JADE2Q9NQC1 790 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 L1RE1Q9UN81 338 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 MYH10P35580 1976 aa15.99■□□□□ 0.15
DDX41-208ENST00000507955 FRMD3A2A2Y4 597 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 PDE2AO00408 941 aaPredicted RBP15.98■□□□□ 0.15
DDX41-208ENST00000507955 SLITRK3O94933 977 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 CXCR5P32302 372 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 VAV2P52735 878 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 HGSNATQ68CP4 663 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 OTOP1Q7RTM1 612 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 TRIM59Q8IWR1 403 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 ERMNQ8TAM6 284 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 SH2D3AQ9BRG2 576 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 GOPCQ9HD26 462 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 SMARCAL1Q9NZC9 954 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 SAR1BQ9Y6B6 198 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 BUB1O43683 1085 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 INPP5BP32019 993 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 CIITAP33076 1130 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 RASSF7Q02833 373 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 CXCL9Q07325 125 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 LRCH2Q5VUJ6 765 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 PDXDC1Q6P996 788 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 FAM20AQ96MK3 541 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 CALCOCO1Q9P1Z2 691 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 ADAM21Q9UKJ8 722 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 HDAC9Q9UKV0 1011 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 RABGAP1Q9Y3P9 1069 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 ABCB11O95342 1321 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 WNT10BO00744 389 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 GCNT3O95395 438 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 SLC9A1P19634 815 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 NMT1P30419 496 aaKnown RBP15.98■□□□□ 0.15
DDX41-208ENST00000507955 KCNH2Q12809 1159 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 CPXCR1Q8N123 301 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 HOMER2Q9NSB8 354 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 EHD2Q9NZN4 543 aa15.98■□□□□ 0.15
DDX41-208ENST00000507955 ASTN2O75129 1339 aaPredicted RBP15.97■□□□□ 0.15
DDX41-208ENST00000507955 GCOM1H8Y6P7 765 aaPredicted RBP15.97■□□□□ 0.15
DDX41-208ENST00000507955 TBX3O15119 743 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 NCK2O43639 380 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 POLR2MP0CAP2 368 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 HNRNPH3P31942 346 aaKnown RBP15.97■□□□□ 0.15
DDX41-208ENST00000507955 WHAMMP3Q1A5X7 153 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 MAEAQ7L5Y9 396 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 LDHDQ86WU2 507 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 SECISBP2LQ93073 1101 aaKnown RBP15.97■□□□□ 0.15
DDX41-208ENST00000507955 VCPKMTQ9H867 229 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 PPP1R1BQ9UD71 204 aaPredicted RBP15.97■□□□□ 0.15
DDX41-208ENST00000507955 FZD1Q9UP38 647 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 AKAP3O75969 853 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 CAP2P40123 477 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 DNA2P51530 1060 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 COG2Q14746 738 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 DCAF17Q5H9S7 520 aaPredicted RBP15.97■□□□□ 0.15
DDX41-208ENST00000507955 RINT1Q6NUQ1 792 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 FAM133AQ8N9E0 248 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 HSD17B14Q9BPX1 270 aa15.97■□□□□ 0.15
DDX41-208ENST00000507955 PIK3CDO00329 1044 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 TUBB2AQ13885 445 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 RAPGEF1Q13905 1077 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.15
DDX41-208ENST00000507955 TCERG1LQ5VWI1 586 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 RTKN2Q8IZC4 609 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 BANK1Q8NDB2 785 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 GDAP1L1Q96MZ0 367 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 TRERF1Q96PN7 1200 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 TUBB2BQ9BVA1 445 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 ZNF341Q9BYN7 854 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 COL20A1Q9P218 1284 aa15.96■□□□□ 0.15
DDX41-208ENST00000507955 PITPNM2Q9BZ72 1349 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 NFIBO00712 420 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 CETN3O15182 167 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 PSMD10O75832 226 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 CYP3A4P08684 503 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 MAGEA1P43355 309 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 CDK17Q00537 523 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 PLS1Q14651 629 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 COG1Q8WTW3 980 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 RANBP17Q9H2T7 1088 aaKnown RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms