RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 GCNT3O95395 438 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 SPDYE6P0CI01 402 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 MATR3P43243 847 aaKnown RBP eCLIP24.27■■□□□ 1.48
SPCS3-203ENST00000507678 MOXD1Q6UVY6 613 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 LARGE2Q8N3Y3 721 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 SYT2Q8N9I0 419 aaPredicted RBP24.27■■□□□ 1.48
SPCS3-203ENST00000507678 IQCDQ96DY2 449 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 CEP63Q96MT8 703 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 FBXO28Q9NVF7 368 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 CALCOCO1Q9P1Z2 691 aa24.27■■□□□ 1.48
SPCS3-203ENST00000507678 KCNH2Q12809 1159 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 SFMBT2Q5VUG0 894 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 FAM133AQ8N9E0 248 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 VAV3Q9UKW4 847 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 ATRNL1Q5VV63 1379 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 H3BQF6 201 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 TLR2O60603 784 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 NPM3O75607 178 aaKnown RBP24.26■■□□□ 1.47
SPCS3-203ENST00000507678 PURBQ96QR8 312 aaKnown RBP24.26■■□□□ 1.47
SPCS3-203ENST00000507678 WDR18Q9BV38 432 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 GLIS2Q9BZE0 524 aaPredicted RBP24.26■■□□□ 1.47
SPCS3-203ENST00000507678 EHD2Q9NZN4 543 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 PKD2L1Q9P0L9 805 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 ZNF70Q9UC06 446 aaPredicted RBP24.26■■□□□ 1.47
SPCS3-203ENST00000507678 RABGAP1Q9Y3P9 1069 aa24.26■■□□□ 1.47
SPCS3-203ENST00000507678 HGSNATQ68CP4 663 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 NFRKBQ6P4R8 1299 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 ZNF662Q6ZS27 426 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 GSPT2Q8IYD1 628 aaKnown RBP24.25■■□□□ 1.47
SPCS3-203ENST00000507678 OGFOD1Q8N543 542 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 COG1Q8WTW3 980 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 FAM20AQ96MK3 541 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 CEP72Q9P209 647 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 TULP2O00295 520 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 TBCAO75347 108 aaKnown RBP24.25■■□□□ 1.47
SPCS3-203ENST00000507678 POLD1P28340 1107 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 SLC20A2Q08357 652 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 SLC9C1Q4G0N8 1177 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 TRIM58Q8NG06 486 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 HDAC9Q9UKV0 1011 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 SRCAPQ6ZRS2 3230 aa24.25■■□□□ 1.47
SPCS3-203ENST00000507678 TBX3O15119 743 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 SLC15A2Q16348 729 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 HDXQ7Z353 690 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 KSR1Q8IVT5 923 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 ZBTB21Q9ULJ3 1066 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 PITPNM2Q9BZ72 1349 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 GNA14O95837 355 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 HOXD13P35453 343 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 KNOP1Q1ED39 458 aaKnown RBP24.24■■□□□ 1.47
SPCS3-203ENST00000507678 LRCH2Q5VUJ6 765 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 RSBN1LQ6PCB5 846 aaPredicted RBP24.24■■□□□ 1.47
SPCS3-203ENST00000507678 DYDC2Q96IM9 177 aa24.24■■□□□ 1.47
SPCS3-203ENST00000507678 MYH10P35580 1976 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 FRMD3A2A2Y4 597 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 N4BP1O75113 896 aaKnown RBP24.23■■□□□ 1.47
SPCS3-203ENST00000507678 TNNT3P45378 269 aaPredicted RBP24.23■■□□□ 1.47
SPCS3-203ENST00000507678 BTNL9Q6UXG8 535 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 GOPCQ9HD26 462 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 HERC5Q9UII4 1024 aaKnown RBP24.23■■□□□ 1.47
SPCS3-203ENST00000507678 L1RE1Q9UN81 338 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 FAM170AA1A519 330 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 DDX39AO00148 427 aaKnown RBP24.23■■□□□ 1.47
SPCS3-203ENST00000507678 SLC9A1P19634 815 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 USP14P54578 494 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 ZNF772Q68DY9 489 aaPredicted RBP24.23■■□□□ 1.47
SPCS3-203ENST00000507678 DNAAF5Q86Y56 855 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 HNRNPLLQ8WVV9 542 aaKnown RBP24.23■■□□□ 1.47
SPCS3-203ENST00000507678 JRKLQ9Y4A0 524 aa24.23■■□□□ 1.47
SPCS3-203ENST00000507678 CASP4P49662 377 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 CKAP4Q07065 602 aaKnown RBP24.22■■□□□ 1.47
SPCS3-203ENST00000507678 SUPT20HQ8NEM7 779 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 ALS2CR12Q96Q35 445 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 ARMCX3Q9UH62 379 aaPredicted RBP24.22■■□□□ 1.47
SPCS3-203ENST00000507678 ADAMTS1Q9UHI8 967 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 PCDHB13Q9Y5F0 798 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 IGLV3-22A0A075B6J6 115 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 ANO9A1A5B4 782 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 GCOM1H8Y6P7 765 aaPredicted RBP24.22■■□□□ 1.47
SPCS3-203ENST00000507678 MAP2K7O14733 419 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 PHACTR2O75167 634 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 POLR2MP0CAP2 368 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 TRMT1LQ7Z2T5 733 aaKnown RBP24.22■■□□□ 1.47
SPCS3-203ENST00000507678 SNX12Q9UMY4 172 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 TMX2Q9Y320 296 aa24.22■■□□□ 1.47
SPCS3-203ENST00000507678 TULP1O00294 542 aaPredicted RBP24.21■■□□□ 1.47
SPCS3-203ENST00000507678 CIITAP33076 1130 aa24.21■■□□□ 1.47
SPCS3-203ENST00000507678 TUBB4BP68371 445 aa24.21■■□□□ 1.47
SPCS3-203ENST00000507678 CASP8Q14790 479 aa24.21■■□□□ 1.47
SPCS3-203ENST00000507678 AKAP3O75969 853 aa24.21■■□□□ 1.47
SPCS3-203ENST00000507678 NMT1P30419 496 aaKnown RBP24.21■■□□□ 1.47
SPCS3-203ENST00000507678 MMP14P50281 582 aa24.21■■□□□ 1.47
SPCS3-203ENST00000507678 KLHL30Q0D2K2 578 aa24.21■■□□□ 1.47
SPCS3-203ENST00000507678 ZC2HC1CQ53FD0 456 aaPredicted RBP24.21■■□□□ 1.47
SPCS3-203ENST00000507678 MCTP2Q6DN12 878 aa24.21■■□□□ 1.47
SPCS3-203ENST00000507678 MYCT1Q8N699 235 aa24.21■■□□□ 1.47
SPCS3-203ENST00000507678 CCDC102AQ96A19 550 aa24.21■■□□□ 1.47
SPCS3-203ENST00000507678 SERPING1P05155 500 aa24.2■■□□□ 1.47
SPCS3-203ENST00000507678 ASTE1Q2TB18 679 aaPredicted RBP24.2■■□□□ 1.47
SPCS3-203ENST00000507678 GAS7O60861 476 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms