RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 PPP4R2Q9NY27 417 aa20.17■□□□□ 0.82
SFXN1-207ENST00000507395 MUC3AQ02505 3323 aa20.17■□□□□ 0.82
SFXN1-207ENST00000507395 KAT6AQ92794 2004 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 TLL1O43897 1013 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 CCNE2O96020 404 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 CHRNA1P02708 482 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 NEFLP07196 543 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 CTSHP09668 335 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 PPFIA1Q13136 1202 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 GRIK4Q16099 956 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 PLPPR4Q7Z2D5 763 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 ZBTB10Q96DT7 871 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 CERS4Q9HA82 394 aa20.16■□□□□ 0.82
SFXN1-207ENST00000507395 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.15■□□□□ 0.82
SFXN1-207ENST00000507395 KIF28PB7ZC32 967 aa20.15■□□□□ 0.82
SFXN1-207ENST00000507395 PLCB4Q15147 1175 aa20.15■□□□□ 0.82
SFXN1-207ENST00000507395 ERICH6BQ5W0A0 696 aa20.15■□□□□ 0.82
SFXN1-207ENST00000507395 ABHD15Q6UXT9 468 aa20.15■□□□□ 0.82
SFXN1-207ENST00000507395 GLG1Q92896 1179 aa20.15■□□□□ 0.82
SFXN1-207ENST00000507395 ZNF274Q96GC6 653 aaPredicted RBP20.15■□□□□ 0.82
SFXN1-207ENST00000507395 RAD9AQ99638 391 aa20.15■□□□□ 0.82
SFXN1-207ENST00000507395 SDF4Q9BRK5 362 aa20.15■□□□□ 0.82
SFXN1-207ENST00000507395 C6orf50Q9HD87 102 aa20.15■□□□□ 0.82
SFXN1-207ENST00000507395 CYP46A1Q9Y6A2 500 aa20.15■□□□□ 0.82
SFXN1-207ENST00000507395 LPXNO60711 386 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 INSRRP14616 1297 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 IGFBP4P22692 258 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 HTRA4P83105 476 aaPredicted RBP20.14■□□□□ 0.81
SFXN1-207ENST00000507395 MCTP2Q6DN12 878 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 TAF2Q6P1X5 1199 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 REXO1Q8N1G1 1221 aaKnown RBP20.14■□□□□ 0.81
SFXN1-207ENST00000507395 RASGRP4Q8TDF6 673 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 CCDC12Q8WUD4 166 aaPredicted RBP20.14■□□□□ 0.81
SFXN1-207ENST00000507395 LARP6Q9BRS8 491 aaKnown RBP20.14■□□□□ 0.81
SFXN1-207ENST00000507395 SLC26A6Q9BXS9 759 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 UPF3BQ9BZI7 483 aaKnown RBP20.14■□□□□ 0.81
SFXN1-207ENST00000507395 TUBE1Q9UJT0 475 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 MTCH2Q9Y6C9 303 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 CUL9Q8IWT3 2517 aa20.14■□□□□ 0.81
SFXN1-207ENST00000507395 GNA11P29992 359 aa20.13■□□□□ 0.81
SFXN1-207ENST00000507395 CIITAP33076 1130 aa20.13■□□□□ 0.81
SFXN1-207ENST00000507395 PLA2G4DQ86XP0 818 aa20.13■□□□□ 0.81
SFXN1-207ENST00000507395 PPM1EQ8WY54 764 aa20.13■□□□□ 0.81
SFXN1-207ENST00000507395 LENG9Q96B70 501 aa20.13■□□□□ 0.81
SFXN1-207ENST00000507395 VPS54Q9P1Q0 977 aa20.13■□□□□ 0.81
SFXN1-207ENST00000507395 COL4A4P53420 1690 aaPredicted RBP20.13■□□□□ 0.81
SFXN1-207ENST00000507395 LINC01553A4QN01 128 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 ATP4AP20648 1035 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 ZNF76P36508 570 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 STAT5BP51692 787 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 NPY5RQ15761 445 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 CCDC85BQ15834 202 aaPredicted RBP20.12■□□□□ 0.81
SFXN1-207ENST00000507395 SP7Q8TDD2 431 aaPredicted RBP20.12■□□□□ 0.81
SFXN1-207ENST00000507395 DNAJB3Q8WWF6 145 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 ARNTL2Q8WYA1 636 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 SEPT8Q92599 483 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 TOP1MTQ969P6 601 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 SH3GLB2Q9NR46 395 aa20.12■□□□□ 0.81
SFXN1-207ENST00000507395 RRN3P2A6NIE6 340 aa20.11■□□□□ 0.81
SFXN1-207ENST00000507395 M0R2N6 131 aa20.11■□□□□ 0.81
SFXN1-207ENST00000507395 IPO5O00410 1097 aaKnown RBP20.11■□□□□ 0.81
SFXN1-207ENST00000507395 ERVK-21P61565 698 aa20.11■□□□□ 0.81
SFXN1-207ENST00000507395 GRB10Q13322 594 aa20.11■□□□□ 0.81
SFXN1-207ENST00000507395 LPIN1Q14693 890 aa20.11■□□□□ 0.81
SFXN1-207ENST00000507395 KRT40Q6A162 431 aa20.11■□□□□ 0.81
SFXN1-207ENST00000507395 CCDC60Q8IWA6 550 aaPredicted RBP20.11■□□□□ 0.81
SFXN1-207ENST00000507395 TRAPPC12Q8WVT3 735 aa20.11■□□□□ 0.81
SFXN1-207ENST00000507395 ZBED2Q9BTP6 218 aa20.11■□□□□ 0.81
SFXN1-207ENST00000507395 IFIH1Q9BYX4 1025 aaKnown RBP20.11■□□□□ 0.81
SFXN1-207ENST00000507395 AZI2Q9H6S1 392 aa20.11■□□□□ 0.81
SFXN1-207ENST00000507395 COL4A6Q14031 1691 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 DDX39AO00148 427 aaKnown RBP20.1■□□□□ 0.81
SFXN1-207ENST00000507395 AMHP03971 560 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 SLC26A2P50443 739 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 IGBP1P78318 339 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 AKAP17AQ02040 695 aaKnown RBP20.1■□□□□ 0.81
SFXN1-207ENST00000507395 FBXO47Q5MNV8 452 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 FAM117BQ6P1L5 589 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 MYOCDQ8IZQ8 938 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 CCDC148Q8NFR7 591 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 APBB2Q92870 758 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 IL17RAQ96F46 866 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 UIMC1Q96RL1 719 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 PCDHA2Q9Y5H9 948 aa20.1■□□□□ 0.81
SFXN1-207ENST00000507395 PRRC2BQ5JSZ5 2229 aaKnown RBP20.09■□□□□ 0.81
SFXN1-207ENST00000507395 ZBTB42B2RXF5 422 aa20.09■□□□□ 0.81
SFXN1-207ENST00000507395 GHRP10912 638 aa20.09■□□□□ 0.81
SFXN1-207ENST00000507395 SETQ01105 290 aaPredicted RBP20.09■□□□□ 0.81
SFXN1-207ENST00000507395 BICD2Q8TD16 824 aa20.09■□□□□ 0.81
SFXN1-207ENST00000507395 ZNF577Q9BSK1 485 aa20.09■□□□□ 0.81
SFXN1-207ENST00000507395 AGO3Q9H9G7 860 aaKnown RBP20.09■□□□□ 0.81
SFXN1-207ENST00000507395 SUGCTQ9HAC7 445 aa20.09■□□□□ 0.81
SFXN1-207ENST00000507395 TBC1D22BQ9NU19 505 aa20.09■□□□□ 0.81
SFXN1-207ENST00000507395 PDRG1Q9NUG6 133 aa20.09■□□□□ 0.81
SFXN1-207ENST00000507395 INSL6Q9Y581 213 aa20.09■□□□□ 0.81
SFXN1-207ENST00000507395 CDY2AQ9Y6F7 541 aa20.09■□□□□ 0.81
SFXN1-207ENST00000507395 POTEB3A0JP26 581 aa20.08■□□□□ 0.81
SFXN1-207ENST00000507395 MRPS6P82932 125 aaKnown RBP20.08■□□□□ 0.81
SFXN1-207ENST00000507395 SSRP1Q08945 709 aaKnown RBP20.08■□□□□ 0.81
SFXN1-207ENST00000507395 POTEBQ6S5H4 581 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms