RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 DHX37Q8IY37 1157 aaKnown RBP12.22□□□□□ -0.45
CPNE4-206ENST00000505957 PNMA1Q8ND90 353 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
CPNE4-206ENST00000505957 NEK9Q8TD19 979 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 GPT2Q8TD30 523 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 WNT8BQ93098 351 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 ZNF396Q96N95 335 aaPredicted RBP12.22□□□□□ -0.45
CPNE4-206ENST00000505957 CPVLQ9H3G5 476 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 KAT14Q9H8E8 782 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 PXMP2Q9NR77 195 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
CPNE4-206ENST00000505957 COL4A4P53420 1690 aaPredicted RBP12.22□□□□□ -0.45
CPNE4-206ENST00000505957 MUC6Q6W4X9 2439 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 CNTNAP5Q8WYK1 1306 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 RSPH10B2B2RC85 870 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 RSPH10BP0C881 870 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 ZNF286BP0CG31 522 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 EIF2AK2P19525 551 aaKnown RBP12.21□□□□□ -0.45
CPNE4-206ENST00000505957 SMARCA1P28370 1054 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 GRM4Q14833 912 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 TIGD5Q53EQ6 642 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 PLEKHG4Q58EX7 1191 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 MYSM1Q5VVJ2 828 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 PTCRAQ6ISU1 281 aaPredicted RBP12.21□□□□□ -0.45
CPNE4-206ENST00000505957 FAM117BQ6P1L5 589 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
CPNE4-206ENST00000505957 SERINC5Q86VE9 423 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 SAMD3Q8N6K7 520 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 DBF4BQ8NFT6 615 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 PHKBQ93100 1093 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 SYAP1Q96A49 352 aaPredicted RBP12.21□□□□□ -0.45
CPNE4-206ENST00000505957 CHAMP1Q96JM3 812 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 LZTS2Q9BRK4 669 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 C17orf80Q9BSJ5 609 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 SLC26A6Q9BXS9 759 aa12.21□□□□□ -0.45
CPNE4-206ENST00000505957 H3BNC9 293 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 FIBPO43427 364 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 DTNBO60941 627 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 CAND2O75155 1236 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 RGS20O76081 388 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 TGFB3P10600 412 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 IL9P15248 144 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 U2AF2P26368 475 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPNE4-206ENST00000505957 HOXC8P31273 242 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-206ENST00000505957 HSD17B4P51659 736 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 ZNF445P59923 1031 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 ZNF200P98182 395 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-206ENST00000505957 TRIM29Q14134 588 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 HIC1Q14526 733 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 COL19A1Q14993 1142 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 EPC2Q52LR7 807 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 CELF3Q5SZQ8 465 aaKnown RBP12.2□□□□□ -0.46
CPNE4-206ENST00000505957 MYOCDQ8IZQ8 938 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 LEO1Q8WVC0 666 aaPredicted RBP12.2□□□□□ -0.46
CPNE4-206ENST00000505957 TOP1MTQ969P6 601 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 PDCD2LQ9BRP1 358 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 KCNH6Q9H252 994 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 JMJD4Q9H9V9 463 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 PRKAG3Q9UGI9 489 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 RCOR1Q9UKL0 485 aa12.2□□□□□ -0.46
CPNE4-206ENST00000505957 TCHHQ07283 1943 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 YEATS4O95619 227 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 CFBP00751 764 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 MMP1P03956 469 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 PARP1P09874 1014 aaKnown RBP12.19□□□□□ -0.46
CPNE4-206ENST00000505957 XBP1P17861 261 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 THPOP40225 353 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 NASPP49321 788 aaPredicted RBP12.19□□□□□ -0.46
CPNE4-206ENST00000505957 AKAP17AQ02040 695 aaKnown RBP12.19□□□□□ -0.46
CPNE4-206ENST00000505957 HSDL1Q3SXM5 330 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 VSIG10LQ86VR7 867 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 BANK1Q8NDB2 785 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 PABPC5Q96DU9 382 aaKnown RBP12.19□□□□□ -0.46
CPNE4-206ENST00000505957 SPATA33Q96N06 139 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 C16orf70Q9BSU1 422 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 AMNQ9BXJ7 453 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 FOXP1Q9H334 677 aaPredicted RBP12.19□□□□□ -0.46
CPNE4-206ENST00000505957 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 RTEL1Q9NZ71 1219 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 FAM50BQ9Y247 325 aa12.19□□□□□ -0.46
CPNE4-206ENST00000505957 MORC2Q9Y6X9 1032 aaPredicted RBP12.19□□□□□ -0.46
CPNE4-206ENST00000505957 SIP14410 1827 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 C17orf102A2RUQ5 167 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 PALM3A6NDB9 673 aaPredicted RBP12.18□□□□□ -0.46
CPNE4-206ENST00000505957 OPLAHO14841 1288 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 DCXO43602 365 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 NCK2O43639 380 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 GADD45BO75293 160 aaPredicted RBP12.18□□□□□ -0.46
CPNE4-206ENST00000505957 GGPS1O95749 300 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 GPM6BQ13491 265 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 PKN1Q16512 942 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 ALYREFQ86V81 257 aaKnown RBP12.18□□□□□ -0.46
CPNE4-206ENST00000505957 SEPT8Q92599 483 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 ATP6V0A1Q93050 837 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms