RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ADGRA3Q8IWK6 1321 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 KMT2BQ9UMN6 2715 aaPredicted RBP7.04□□□□□ -1.28
GYPB-204ENST00000504951 C17orf102A2RUQ5 167 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 LCE2BO14633 110 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 ENPP3O14638 875 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 LINC01565O15544 149 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 GLP2RO95838 553 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 HOXB8P17481 243 aaPredicted RBP7.04□□□□□ -1.28
GYPB-204ENST00000504951 SNAP25P60880 206 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 ZNF200P98182 395 aaPredicted RBP7.04□□□□□ -1.28
GYPB-204ENST00000504951 PUM1Q14671 1186 aaKnown RBP eCLIP7.04□□□□□ -1.28
GYPB-204ENST00000504951 ALX1Q15699 326 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 CELF3Q5SZQ8 465 aaKnown RBP7.04□□□□□ -1.28
GYPB-204ENST00000504951 GPATCH4Q5T3I0 446 aaKnown RBP7.04□□□□□ -1.28
GYPB-204ENST00000504951 TSHZ3Q63HK5 1081 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 TTBK2Q6IQ55 1244 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 CMTR2Q8IYT2 770 aaKnown RBP7.04□□□□□ -1.28
GYPB-204ENST00000504951 SPRYD3Q8NCJ5 442 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 SYTL5Q8TDW5 730 aaPredicted RBP7.04□□□□□ -1.28
GYPB-204ENST00000504951 PPP1R13LQ8WUF5 828 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 ATP6V0A1Q93050 837 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 USP26Q9BXU7 913 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 RNPEPQ9H4A4 650 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 DDX19BQ9UMR2 479 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 SORCS3Q9UPU3 1222 aa7.04□□□□□ -1.28
GYPB-204ENST00000504951 TPRP12270 2363 aaKnown RBP7.04□□□□□ -1.28
GYPB-204ENST00000504951 ABCB11O95342 1321 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 ATG2AQ2TAZ0 1938 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 KIAA1217Q5T5P2 1943 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 TSPY2A6NKD2 308 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 H3BRB1 525 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 UPP2O95045 317 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 ITGB1P05556 798 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 NR3C2P08235 984 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 PDHBP11177 359 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 PCP11498 1178 aaKnown RBP7.03□□□□□ -1.28
GYPB-204ENST00000504951 MS4A1P11836 297 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 GTF2F1P35269 517 aaKnown RBP eCLIP7.03□□□□□ -1.28
GYPB-204ENST00000504951 ZNF543Q08ER8 600 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 CLUL1Q15846 466 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 TAF2Q6P1X5 1199 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 SEPT14Q6ZU15 432 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 STOX1Q6ZVD7 989 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 RASGRP2Q7LDG7 609 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 VSIG10LQ86VR7 867 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 DHX37Q8IY37 1157 aaKnown RBP7.03□□□□□ -1.28
GYPB-204ENST00000504951 ADSSL1Q8N142 457 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 ZNF516Q92618 1163 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 TAAR1Q96RJ0 339 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 RMDN3Q96TC7 470 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 TMEM47Q9BQJ4 181 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 ALG1Q9BT22 464 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 FTHL17Q9BXU8 183 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 NAPBQ9H115 298 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 CHMP4BQ9H444 224 aaKnown RBP7.03□□□□□ -1.28
GYPB-204ENST00000504951 TUT1Q9H6E5 874 aaKnown RBP7.03□□□□□ -1.28
GYPB-204ENST00000504951 ECHDC1Q9NTX5 307 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 DLL3Q9NYJ7 618 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 LZTS1Q9Y250 596 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 NR2E1Q9Y466 385 aa7.03□□□□□ -1.28
GYPB-204ENST00000504951 EP300Q09472 2414 aaPredicted RBP7.03□□□□□ -1.28
GYPB-204ENST00000504951 M0R2C6 588 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 TREHO43280 583 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 APPP05067 770 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 HSPD1P10809 573 aaKnown RBP7.02□□□□□ -1.29
GYPB-204ENST00000504951 DNAJB1P25685 340 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 SLC16A2P36021 539 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 HSD17B4P51659 736 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 BTG3Q14201 252 aaPredicted RBP7.02□□□□□ -1.29
GYPB-204ENST00000504951 DUSP6Q16828 381 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 CCDC96Q2M329 555 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 HSDL1Q3SXM5 330 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 ZMYM1Q5SVZ6 1142 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 DIEXFQ68CQ4 756 aaKnown RBP7.02□□□□□ -1.29
GYPB-204ENST00000504951 TMEM105Q8N8V8 129 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 POF1BQ8WVV4 589 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 RPGRIP1Q96KN7 1286 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 NECTIN4Q96NY8 510 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 NEK1Q96PY6 1258 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 OSBPL7Q9BZF2 842 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 LRRCC1Q9C099 1032 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 IGFLR1Q9H665 355 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 TLE6Q9H808 572 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 INCENPQ9NQS7 918 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 USTQ9Y2C2 406 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 MRPL11Q9Y3B7 192 aaKnown RBP7.02□□□□□ -1.29
GYPB-204ENST00000504951 MRVI1Q9Y6F6 885 aa7.02□□□□□ -1.29
GYPB-204ENST00000504951 NRCAMQ92823 1304 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 FSCN2O14926 492 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 STAM2O75886 525 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 CHRNA1P02708 482 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 ZNF286BP0CG31 522 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 SRGAP2BP0DMP2 458 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 SMIM10L2AP0DMW4 78 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 SMIM10L2BP0DMW5 78 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 SDHBP21912 280 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 NRIP1P48552 1158 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 CHMP4BP1P59074 171 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 ITIH3Q06033 890 aa7.01□□□□□ -1.29
GYPB-204ENST00000504951 MGAT3Q09327 533 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms