RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MAP3K9P80192 1104 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 DPYDQ12882 1025 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 PDIA5Q14554 519 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 NAA35Q5VZE5 725 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 CYFIP1Q7L576 1253 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 UBE2TQ9NPD8 197 aaPredicted RBP15.39■□□□□ 0.05
TCOF1-207ENST00000504761 AGTPBP1Q9UPW5 1226 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 NR3C1P04150 777 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 CXCR5P32302 372 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
TCOF1-207ENST00000504761 NT5C1BQ96P26 610 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 TEX13BQ9BXU2 312 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 LGALS16A8MUM7 142 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 NDUFA10O95299 355 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 PIK3CAP42336 1068 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 CFAP221Q4G0U5 840 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 PHLDB2Q86SQ0 1253 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 UBL4BQ8N7F7 174 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 NHEJ1Q9H9Q4 299 aaPredicted RBP15.38■□□□□ 0.05
TCOF1-207ENST00000504761 FBXO40Q9UH90 709 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 N4BP1O75113 896 aaKnown RBP15.38■□□□□ 0.05
TCOF1-207ENST00000504761 YARSP54577 528 aaKnown RBP15.38■□□□□ 0.05
TCOF1-207ENST00000504761 RETREG2Q8NC44 543 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 BPIFA3Q9BQP9 254 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 TUBE1Q9UJT0 475 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 WNT10BO00744 389 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 CYTH3O43739 400 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 TOGARAM2Q6ZUX3 1019 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 THNSL1Q8IYQ7 743 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 ADAMTSL3P82987 1691 aa15.38■□□□□ 0.05
TCOF1-207ENST00000504761 USP27XA6NNY8 438 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 TNNC2P02585 160 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 MYZAPP0CAP1 466 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 GCLMP48507 274 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 KRT76Q01546 638 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 CALCOCO2Q13137 446 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 POTEAQ6S8J7 498 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 FAM163AQ96GL9 167 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-207ENST00000504761 NXF1Q9UBU9 619 aaKnown RBP15.37■□□□□ 0.05
TCOF1-207ENST00000504761 AMFRQ9UKV5 643 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 PNMA3Q9UL41 463 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 DDNO94850 711 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-207ENST00000504761 JAK3P52333 1124 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 ORC2Q13416 577 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-207ENST00000504761 TTC26A0AVF1 554 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 PDE6CP51160 858 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 TGFB2P61812 414 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 KCNH2Q12809 1159 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 KNOP1Q1ED39 458 aaKnown RBP15.37■□□□□ 0.05
TCOF1-207ENST00000504761 CRY2Q49AN0 593 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 GUF1Q8N442 669 aaKnown RBP15.37■□□□□ 0.05
TCOF1-207ENST00000504761 CCDC26Q8TAB7 109 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 VPS18Q9P253 973 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 NR3C2P08235 984 aa15.37■□□□□ 0.05
TCOF1-207ENST00000504761 RPS6P62753 249 aaKnown RBP15.37■□□□□ 0.05
TCOF1-207ENST00000504761 UBLCP1Q8WVY7 318 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-207ENST00000504761 FBXL16Q8N461 479 aa15.36■□□□□ 0.05
TCOF1-207ENST00000504761 DENND3A2RUS2 1198 aa15.36■□□□□ 0.05
TCOF1-207ENST00000504761 RPS12P25398 132 aaKnown RBP15.36■□□□□ 0.05
TCOF1-207ENST00000504761 CFAP58Q5T655 872 aa15.36■□□□□ 0.05
TCOF1-207ENST00000504761 NLRP7Q8WX94 980 aa15.36■□□□□ 0.05
TCOF1-207ENST00000504761 CTNND1O60716 968 aaKnown RBP15.36■□□□□ 0.05
TCOF1-207ENST00000504761 TRIM49P0CI25 452 aa15.36■□□□□ 0.05
TCOF1-207ENST00000504761 TRIM49CP0CI26 452 aa15.36■□□□□ 0.05
TCOF1-207ENST00000504761 LMNB1P20700 586 aa15.36■□□□□ 0.05
TCOF1-207ENST00000504761 BEGAINQ9BUH8 593 aa15.36■□□□□ 0.05
TCOF1-207ENST00000504761 SLC8A3P57103 927 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 MESDQ14696 234 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 MTF1Q14872 753 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 CCDC155Q8N6L0 562 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 SAAL1Q96ER3 474 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 CD58P19256 250 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 SMARCA1P28370 1054 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 KIF11P52732 1056 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 TUBB4BP68371 445 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 TFDP1Q14186 410 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 MAK16Q9BXY0 300 aaKnown RBP15.35■□□□□ 0.05
TCOF1-207ENST00000504761 PCDHB4Q9Y5E5 795 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 PCDHA10Q9Y5I2 948 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 ESYT2A0FGR8 921 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 HIP1RO75146 1068 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 FTCDO95954 541 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 LACTBP83111 547 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-207ENST00000504761 MAP2K1Q02750 393 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-207ENST00000504761 EPHA7Q15375 998 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 ADSSL1Q8N142 457 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 PANX2Q96RD6 677 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 AP5M1Q9H0R1 490 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 MOCS3O95396 460 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 VPS41P49754 854 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 PSMC5P62195 406 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 PTK2Q05397 1052 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 CCDC105Q8IYK2 499 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 SYCE1Q8N0S2 351 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 MRRFQ96E11 262 aaKnown RBP15.35■□□□□ 0.05
TCOF1-207ENST00000504761 TAAR1Q96RJ0 339 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 ABHD10Q9NUJ1 306 aa15.35■□□□□ 0.05
TCOF1-207ENST00000504761 TUBB2AQ13885 445 aa15.34■□□□□ 0.05
TCOF1-207ENST00000504761 LONRF2Q1L5Z9 754 aa15.34■□□□□ 0.05
TCOF1-207ENST00000504761 PROCA1Q8NCQ7 364 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms