RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 POU3F3P20264 500 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 CIITAP33076 1130 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 ACTR2P61160 394 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 CCT2P78371 535 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 FGD1P98174 961 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 PPP2R2DQ66LE6 453 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 RASGRP4Q8TDF6 673 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 ZNF274Q96GC6 653 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 ERAP1Q9NZ08 941 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 NAP1L2Q9ULW6 460 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 XIRP2A4UGR9 3374 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-211ENST00000504318 LPXNO60711 386 aa15.96■□□□□ 0.15
PDLIM7-211ENST00000504318 MARK3P27448 753 aa15.96■□□□□ 0.15
PDLIM7-211ENST00000504318 GRIK4Q16099 956 aa15.96■□□□□ 0.15
PDLIM7-211ENST00000504318 ABHD15Q6UXT9 468 aa15.96■□□□□ 0.15
PDLIM7-211ENST00000504318 ZBTB10Q96DT7 871 aa15.96■□□□□ 0.15
PDLIM7-211ENST00000504318 LARP6Q9BRS8 491 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-211ENST00000504318 SMARCAD1Q9H4L7 1026 aa15.96■□□□□ 0.15
PDLIM7-211ENST00000504318 PRDM6Q9NQX0 595 aa15.96■□□□□ 0.15
PDLIM7-211ENST00000504318 CTSHP09668 335 aa15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 GNAT1P11488 350 aa15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 ATP4AP20648 1035 aa15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 PPFIA1Q13136 1202 aa15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 PLCB4Q15147 1175 aa15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 PLPPR4Q7Z2D5 763 aa15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 REXO1Q8N1G1 1221 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 SLC26A6Q9BXS9 759 aa15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 VPS54Q9P1Q0 977 aa15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 CYP46A1Q9Y6A2 500 aa15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 MYH9P35579 1960 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-211ENST00000504318 TTC3P53804 2025 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 ZBTB42B2RXF5 422 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 RFXAPO00287 272 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 EFCAB14O75071 495 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 INSRRP14616 1297 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 HTRA4P83105 476 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 IKBKEQ14164 716 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 TAF2Q6P1X5 1199 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 CCDC60Q8IWA6 550 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 SP7Q8TDD2 431 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 AIFM3Q96NN9 605 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 GAS2L1Q99501 681 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 COL25A1Q9BXS0 654 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 C6orf50Q9HD87 102 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 SH3GLB2Q9NR46 395 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 TUBE1Q9UJT0 475 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 TTC28Q96AY4 2481 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 EVPLQ92817 2033 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 ATG2AQ2TAZ0 1938 aa15.94■□□□□ 0.14
PDLIM7-211ENST00000504318 DLL1O00548 723 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 TLL1O43897 1013 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 GNA11P29992 359 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 KCNJ6P48051 423 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 SCRN1Q12765 414 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 PLA2G4DQ86XP0 818 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 CCDC12Q8WUD4 166 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 TRAPPC12Q8WVT3 735 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 GLG1Q92896 1179 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 SDF4Q9BRK5 362 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 MTCH2Q9Y6C9 303 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 NLRC5Q86WI3 1866 aa15.93■□□□□ 0.14
PDLIM7-211ENST00000504318 IPO5O00410 1097 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 STAT5BP51692 787 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 LPIN1Q14693 890 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 MCTP2Q6DN12 878 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 DAGLBQ8NCG7 672 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 CCDC148Q8NFR7 591 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 DNAJB3Q8WWF6 145 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 TOP1MTQ969P6 601 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 RAD9AQ99638 391 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 CERS4Q9HA82 394 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 RC3H2Q9HBD1 1191 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 PDRG1Q9NUG6 133 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 TPCN1Q9ULQ1 816 aa15.92■□□□□ 0.14
PDLIM7-211ENST00000504318 LINC01553A4QN01 128 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 RRN3P2A6NIE6 340 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 CTDNEP1O95476 244 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 LINC00271P0C7V0 271 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 ANAPC15P60006 121 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 ERVK-21P61565 698 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 SETQ01105 290 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 FBXO47Q5MNV8 452 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 KRT40Q6A162 431 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 B3GNT9Q6UX72 402 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 CRIPAKQ8N1N5 446 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 LINC01599Q8WXQ3 324 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 MBOAT7Q96N66 472 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 UIMC1Q96RL1 719 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 AGO3Q9H9G7 860 aaKnown RBP15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 PCDHA2Q9Y5H9 948 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 MAFBQ9Y5Q3 323 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 BRWD1Q9NSI6 2320 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 RALGAPA2Q2PPJ7 1873 aa15.91■□□□□ 0.14
PDLIM7-211ENST00000504318 KIF28PB7ZC32 967 aa15.9■□□□□ 0.14
PDLIM7-211ENST00000504318 DDX39AO00148 427 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-211ENST00000504318 DEXIO95424 95 aa15.9■□□□□ 0.14
PDLIM7-211ENST00000504318 SEC24BO95487 1268 aa15.9■□□□□ 0.14
PDLIM7-211ENST00000504318 GHRP10912 638 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms