RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 GDPD5Q8WTR4 605 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 SEPT8Q92599 483 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 SUGCTQ9HAC7 445 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 JPH1Q9HDC5 661 aaPredicted RBP13.64□□□□□ -0.23
MED28-203ENST00000503945 SLC9A2Q9UBY0 812 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 BRWD1Q9NSI6 2320 aa13.64□□□□□ -0.23
MED28-203ENST00000503945 COL4A4P53420 1690 aaPredicted RBP13.63□□□□□ -0.23
MED28-203ENST00000503945 RRN3P2A6NIE6 340 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 MEIS1O00470 390 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 AMHP03971 560 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 ARP10275 920 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 PLA2G5P39877 138 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 ADAM17P78536 824 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 PPFIA1Q13136 1202 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 MBTPS1Q14703 1052 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 PLEKHG4Q58EX7 1191 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 JAKMIP3Q5VZ66 844 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 RUFY3Q7L099 469 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 LMBR1Q8WVP7 490 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
MED28-203ENST00000503945 FAM122AQ96E09 287 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 PGBD1Q96JS3 809 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 LRFN3Q9BTN0 628 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 ANO3Q9BYT9 981 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 TMEM260Q9NX78 707 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 LMCD1Q9NZU5 365 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 INSL6Q9Y581 213 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 CYP46A1Q9Y6A2 500 aa13.63□□□□□ -0.23
MED28-203ENST00000503945 GJB5O95377 273 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 CTSHP09668 335 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 MARK3P27448 753 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
MED28-203ENST00000503945 SREBF1P36956 1147 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 STAT5BP51692 787 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 ERVK-21P61565 698 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 GRIK4Q16099 956 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 FAM117BQ6P1L5 589 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 PLPPR4Q7Z2D5 763 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 BICD2Q8TD16 824 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 AGXT2Q9BYV1 514 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 ZMYND12Q9H0C1 365 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 AGO4Q9HCK5 861 aaKnown RBP13.62□□□□□ -0.23
MED28-203ENST00000503945 MTUS1Q9ULD2 1270 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 SIP14410 1827 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 NFASCO94856 1347 aa13.62□□□□□ -0.23
MED28-203ENST00000503945 LINC01553A4QN01 128 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 RPLP2P05387 115 aaKnown RBP13.61□□□□□ -0.23
MED28-203ENST00000503945 CYP3A4P08684 503 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 INSRRP14616 1297 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
MED28-203ENST00000503945 EVCP57679 992 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 ACTR2P61160 394 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
MED28-203ENST00000503945 FAM26DQ5JW98 314 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
MED28-203ENST00000503945 NIPA1Q7RTP0 329 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 RPAINQ86UA6 219 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 PLA2G4DQ86XP0 818 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 APBB2Q92870 758 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 PHKBQ93100 1093 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
MED28-203ENST00000503945 CD320Q9NPF0 282 aa13.61□□□□□ -0.23
MED28-203ENST00000503945 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.6□□□□□ -0.23
MED28-203ENST00000503945 ESYT2A0FGR8 921 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 CHRNA1P02708 482 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 SLC26A2P50443 739 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 IGBP1P78318 339 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 SSRP1Q08945 709 aaKnown RBP13.6□□□□□ -0.23
MED28-203ENST00000503945 PKN1Q16512 942 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 IER5Q5VY09 327 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 MICAL3Q7RTP6 2002 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 TRIM22Q8IYM9 498 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 MYOCDQ8IZQ8 938 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
MED28-203ENST00000503945 DNAJB3Q8WWF6 145 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 TOP1MTQ969P6 601 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 SLC26A6Q9BXS9 759 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 RNF26Q9BY78 433 aaPredicted RBP13.6□□□□□ -0.23
MED28-203ENST00000503945 TBC1D22BQ9NU19 505 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 TUBE1Q9UJT0 475 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
MED28-203ENST00000503945 POTEB3A0JP26 581 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 MBLAC1A4D2B0 266 aaPredicted RBP13.59□□□□□ -0.23
MED28-203ENST00000503945 FAM86B1E9PN63 330 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 IPO5O00410 1097 aaKnown RBP13.59□□□□□ -0.23
MED28-203ENST00000503945 CPLX1O14810 134 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 BACH1O14867 736 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 UPP2O95045 317 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 ATG7O95352 703 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 FAM86B2P0C5J1 330 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 IFNAR1P17181 557 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 NTRK3Q16288 839 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 MARCH8Q5T0T0 291 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 ERICH6BQ5W0A0 696 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 FAM160B1Q5W0V3 765 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 POTEBQ6S5H4 581 aa13.59□□□□□ -0.23
MED28-203ENST00000503945 NME8Q8N427 588 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms