RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 PCSK4Q6UW60 755 aa5.74□□□□□ -1.49
PROM1-203ENST00000502943 OTOP3Q7RTS5 596 aa5.74□□□□□ -1.49
PROM1-203ENST00000502943 UHMK1Q8TAS1 419 aaKnown RBP5.74□□□□□ -1.49
PROM1-203ENST00000502943 C12orf65Q9H3J6 166 aaKnown RBP5.74□□□□□ -1.49
PROM1-203ENST00000502943 NR2E1Q9Y466 385 aa5.74□□□□□ -1.49
PROM1-203ENST00000502943 DMRT1Q9Y5R6 373 aa5.74□□□□□ -1.49
PROM1-203ENST00000502943 RECKO95980 971 aa5.73□□□□□ -1.49
PROM1-203ENST00000502943 GRIA2P42262 883 aa5.73□□□□□ -1.49
PROM1-203ENST00000502943 TBR1Q16650 682 aa5.73□□□□□ -1.49
PROM1-203ENST00000502943 MRGPRGQ86SM5 289 aa5.73□□□□□ -1.49
PROM1-203ENST00000502943 FAM178BQ8IXR5 827 aa5.73□□□□□ -1.49
PROM1-203ENST00000502943 SLC39A2Q9NP94 309 aa5.73□□□□□ -1.49
PROM1-203ENST00000502943 TLR9Q9NR96 1032 aa5.73□□□□□ -1.49
PROM1-203ENST00000502943 BICRAQ9NZM4 1560 aa5.72□□□□□ -1.49
PROM1-203ENST00000502943 SCAMP3O14828 347 aaKnown RBP5.72□□□□□ -1.49
PROM1-203ENST00000502943 NKRFO15226 690 aaKnown RBP eCLIP5.72□□□□□ -1.49
PROM1-203ENST00000502943 FOXL1Q12952 345 aa5.72□□□□□ -1.49
PROM1-203ENST00000502943 LARP1BQ659C4 914 aaKnown RBP5.72□□□□□ -1.49
PROM1-203ENST00000502943 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.72□□□□□ -1.49
PROM1-203ENST00000502943 KCNJ15Q99712 375 aa5.72□□□□□ -1.49
PROM1-203ENST00000502943 WDR26Q9H7D7 661 aa5.72□□□□□ -1.49
PROM1-203ENST00000502943 GPR27Q9NS67 375 aa5.72□□□□□ -1.49
PROM1-203ENST00000502943 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.72□□□□□ -1.49
PROM1-203ENST00000502943 ACOT7O00154 380 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 SMAD7O15105 426 aaKnown RBP5.71□□□□□ -1.5
PROM1-203ENST00000502943 CUTAO60888 179 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 CAPNS1P04632 268 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 MAKP20794 623 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 HIBADHP31937 336 aaKnown RBP5.71□□□□□ -1.5
PROM1-203ENST00000502943 MSX2P35548 267 aaPredicted RBP5.71□□□□□ -1.5
PROM1-203ENST00000502943 ZMAT1Q5H9K5 638 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 MRM1Q6IN84 353 aaKnown RBP5.71□□□□□ -1.5
PROM1-203ENST00000502943 DPY19L2P1Q6NXN4 242 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 CLIP3Q96DZ5 547 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 SEC16BQ96JE7 1060 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 PHF20Q9BVI0 1012 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 PDGFDQ9GZP0 370 aaPredicted RBP5.71□□□□□ -1.5
PROM1-203ENST00000502943 KIAA1683Q9H0B3 1180 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 UNC13AQ9UPW8 1703 aa5.71□□□□□ -1.5
PROM1-203ENST00000502943 GNAT1P11488 350 aa5.7□□□□□ -1.5
PROM1-203ENST00000502943 GRK2P25098 689 aa5.7□□□□□ -1.5
PROM1-203ENST00000502943 GRK3P35626 688 aa5.7□□□□□ -1.5
PROM1-203ENST00000502943 USP53Q70EK8 1073 aa5.7□□□□□ -1.5
PROM1-203ENST00000502943 CFHR4Q92496 578 aa5.7□□□□□ -1.5
PROM1-203ENST00000502943 CEP72Q9P209 647 aa5.7□□□□□ -1.5
PROM1-203ENST00000502943 DSEQ9UL01 958 aa5.7□□□□□ -1.5
PROM1-203ENST00000502943 REXO2Q9Y3B8 237 aaKnown RBP5.7□□□□□ -1.5
PROM1-203ENST00000502943 ARHGAP6O43182 974 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 PDE6AP16499 860 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 KRT4P19013 534 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 RPS19P39019 145 aaKnown RBP5.69□□□□□ -1.5
PROM1-203ENST00000502943 ETV4P43268 484 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 SPIRE1Q08AE8 756 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 MAP4K2Q12851 820 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 HABP4Q5JVS0 413 aaKnown RBP5.69□□□□□ -1.5
PROM1-203ENST00000502943 Q6ZPA2 131 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 KCTD1Q719H9 257 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 NT5DC4Q86YG4 428 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 KCTD13Q8WZ19 329 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 VOPP1Q96AW1 172 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 SLC2A4RGQ9NR83 387 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 ACTR10Q9NZ32 417 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 STRIP2Q9ULQ0 834 aa5.69□□□□□ -1.5
PROM1-203ENST00000502943 RAMP2O60895 175 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 DDAH1O94760 285 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 DNAJA1P31689 397 aaKnown RBP5.68□□□□□ -1.5
PROM1-203ENST00000502943 EPHA5P54756 1037 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 PPP2R2AP63151 447 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 NFYCQ13952 458 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 LARP4Q71RC2 724 aaKnown RBP eCLIP5.68□□□□□ -1.5
PROM1-203ENST00000502943 MICAL1Q8TDZ2 1067 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 SCYL1Q96KG9 808 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 IER2Q9BTL4 223 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 CD244Q9BZW8 370 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 ZNF703Q9H7S9 590 aaPredicted RBP5.68□□□□□ -1.5
PROM1-203ENST00000502943 PLA2G3Q9NZ20 509 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 HECAQ9UBI9 543 aaPredicted RBP5.68□□□□□ -1.5
PROM1-203ENST00000502943 PUF60Q9UHX1 559 aaKnown RBP5.68□□□□□ -1.5
PROM1-203ENST00000502943 NUB1Q9Y5A7 615 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 CUX2O14529 1486 aa5.68□□□□□ -1.5
PROM1-203ENST00000502943 DLX3O60479 287 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 LMO1P25800 156 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 ADCY8P40145 1251 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 KCNQ1P51787 676 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 COL10A1Q03692 680 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 DBPQ10586 325 aaPredicted RBP5.67□□□□□ -1.5
PROM1-203ENST00000502943 WDR72Q3MJ13 1102 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 KCNT2Q6UVM3 1135 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 TTPALQ9BTX7 342 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 ZDHHC5Q9C0B5 715 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 MRVI1Q9Y6F6 885 aa5.67□□□□□ -1.5
PROM1-203ENST00000502943 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.66□□□□□ -1.5
PROM1-203ENST00000502943 HMGCRP04035 888 aa5.66□□□□□ -1.5
PROM1-203ENST00000502943 IL12RB1P42701 662 aa5.66□□□□□ -1.5
PROM1-203ENST00000502943 HDLBPQ00341 1268 aaKnown RBP5.66□□□□□ -1.5
PROM1-203ENST00000502943 DPP8Q6V1X1 898 aaPredicted RBP5.66□□□□□ -1.5
PROM1-203ENST00000502943 LBX2Q6XYB7 198 aa5.66□□□□□ -1.5
PROM1-203ENST00000502943 SGMS1Q86VZ5 419 aa5.66□□□□□ -1.5
PROM1-203ENST00000502943 SCUBE1Q8IWY4 988 aa5.66□□□□□ -1.5
PROM1-203ENST00000502943 GPR135Q8IZ08 494 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms