RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	TNMD	Q9H2S6	317 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	MAGEF1	Q9HAY2	307 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	TUFT1	Q9NNX1	390 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	KBTBD4	Q9NVX7	518 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	FLRT1	Q9NZU1	646 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	STK17A	Q9UEE5	414 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	DDX41	Q9UJV9	622 aa	Known RBP	13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	DDX39A	O00148	427 aa	Known RBP	13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	FARP2	O94887	1054 aa	Predicted RBP	13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	SLITRK3	O94933	977 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	LETM1	O95202	739 aa	Predicted RBP	13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	ATG7	O95352	703 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	XRCC5	P13010	732 aa	Known RBP	13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	SFN	P31947	248 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	STAT6	P42226	847 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	JAK3	P52333	1124 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	C1QTNF8	P60827	252 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	FOXK1	P85037	733 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	KANK3	Q6NY19	840 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	EEPD1	Q7L9B9	569 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	MIER3	Q7Z3K6	550 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	SPATA20	Q8TB22	786 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	PAGE5	Q96GU1	130 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	DYDC2	Q96IM9	177 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	SDF4	Q9BRK5	362 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	ANP32E	Q9BTT0	268 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	JPH1	Q9HDC5	661 aa	Predicted RBP	13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	PDGFC	Q9NRA1	345 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	RGL1	Q9NZL6	768 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	PCDH10	Q9P2E7	1040 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	SLC9A2	Q9UBY0	812 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	TUBE1	Q9UJT0	475 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	TELO2	Q9Y4R8	837 aa		13.62	□□□□□ -0.23
MATR3-231	ENST00000502394	SYCE3	A1L190	88 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	WDR64	B1ANS9	1081 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	GPR25	O00155	361 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	CHMP2A	O43633	222 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	LYPLA2	O95372	231 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	SLC34A2	O95436	690 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	SARS	P49591	514 aa	Known RBP	13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	NEDD9	Q14511	834 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	POSTN	Q15063	836 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	CCL14	Q16627	93 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	NT5DC1	Q5TFE4	455 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	ABHD15	Q6UXT9	468 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	GRAMD1C	Q8IYS0	662 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	CEP57L1	Q8IYX8	460 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	ZNF710	Q8N1W2	664 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	SCFD2	Q8WU76	684 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	RAD54L	Q92698	747 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	PLIN2	Q99541	437 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	ABHD16B	Q9H3Z7	469 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	KIAA1468	Q9P260	1216 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	GABRQ	Q9UN88	632 aa		13.61	□□□□□ -0.23
MATR3-231	ENST00000502394	IGKV6D-21	A0A0A0MT36	114 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	P4HB	P07237	508 aa	Known RBP	13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	CYP2B6	P20813	491 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	ACTR2	P61160	394 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	DPYD	Q12882	1025 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	PNOC	Q13519	176 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	TTLL4	Q14679	1199 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	LY6K	Q17RY6	165 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	CELF3	Q5SZQ8	465 aa	Known RBP	13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	TMEM63B	Q5T3F8	832 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	CNNM4	Q6P4Q7	775 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	METTL7B	Q6UX53	244 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	CYFIP1	Q7L576	1253 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	CKAP2L	Q8IYA6	745 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	LARP4B	Q92615	738 aa	Known RBP	13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	CDK5RAP3	Q96JB5	506 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	KIAA1024	Q9UPX6	916 aa		13.6	□□□□□ -0.23
MATR3-231	ENST00000502394	DOCK5	Q9H7D0	1870 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	GSTTP1	A0A1W2PQM5	241 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394		E9PMD0	336 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	GGPS1	O95749	300 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	MYL1	P05976	194 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	SUPT20HL2	P0C7V6	817 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	FLT3LG	P49771	235 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	EMP3	P54852	163 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	SLC12A3	P55017	1021 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	PSMC6	P62333	389 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	CYP4A11	Q02928	519 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	PRKCZ	Q05513	592 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	ACVR2B	Q13705	512 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	CTTN	Q14247	550 aa	Known RBP	13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	MCM6	Q14566	821 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	ZRSR1	Q15695	479 aa	Known RBP	13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	UGCG	Q16739	394 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	LRSAM1	Q6UWE0	723 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	RASSF8	Q8NHQ8	419 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	ERCC4	Q92889	916 aa	Predicted RBP	13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	EMID1	Q96A84	441 aa	Predicted RBP	13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	C7orf25	Q9BPX7	421 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	LXN	Q9BS40	222 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	PCDHA5	Q9Y5H7	936 aa		13.59	□□□□□ -0.23
MATR3-231	ENST00000502394	PCDHA10	Q9Y5I2	948 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms