RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 PLD2O14939 933 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 OPA1O60313 960 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 ZNF28P17035 718 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 SDSP20132 328 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 LACTBP83111 547 aaPredicted RBP3.69□□□□□ -1.82
SMAD1-203ENST00000502342 DBPQ10586 325 aaPredicted RBP3.69□□□□□ -1.82
SMAD1-203ENST00000502342 TMEM132BQ14DG7 1078 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 TRIM61Q5EBN2 209 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 FSTL4Q6MZW2 842 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 PKN3Q6P5Z2 889 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 OVCH1Q7RTY7 1134 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 FRMD5Q7Z6J6 570 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 C2orf69Q8N8R5 385 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 ERCC4Q92889 916 aaPredicted RBP3.69□□□□□ -1.82
SMAD1-203ENST00000502342 LCORQ96JN0 433 aaPredicted RBP3.69□□□□□ -1.82
SMAD1-203ENST00000502342 RNPC3Q96LT9 517 aaKnown RBP3.69□□□□□ -1.82
SMAD1-203ENST00000502342 WRNIP1Q96S55 665 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 BDH2Q9BUT1 245 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 TRIM39Q9HCM9 518 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 DLL4Q9NR61 685 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 UCKL1Q9NWZ5 548 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 ARHGAP28Q9P2N2 729 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 FTSJ1Q9UET6 329 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 INVSQ9Y283 1065 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 ZNF536O15090 1300 aa3.69□□□□□ -1.82
SMAD1-203ENST00000502342 PRAMEF22A3QJZ6 481 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 ZNF839A8K0R7 811 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 M0R2C6 588 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 C4BPAP04003 597 aaKnown RBP3.68□□□□□ -1.82
SMAD1-203ENST00000502342 MC4RP32245 332 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 BUD31P41223 144 aaPredicted RBP3.68□□□□□ -1.82
SMAD1-203ENST00000502342 NFATC3Q12968 1075 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 ZNF460Q14592 562 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 SMAD2Q15796 467 aaKnown RBP3.68□□□□□ -1.82
SMAD1-203ENST00000502342 TM4SF20Q53R12 229 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 FAM26FQ5R3K3 315 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 BORAQ6PGQ7 559 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 UBE2R2Q712K3 238 aaPredicted RBP3.68□□□□□ -1.82
SMAD1-203ENST00000502342 DDX53Q86TM3 631 aaKnown RBP3.68□□□□□ -1.82
SMAD1-203ENST00000502342 WDR48Q8TAF3 677 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 IGDCC4Q8TDY8 1250 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 YTHDC1Q96MU7 727 aaKnown RBP3.68□□□□□ -1.82
SMAD1-203ENST00000502342 TEPSINQ96N21 525 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 PTPN18Q99952 460 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 RTEL1Q9NZ71 1219 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 HSPBP1Q9NZL4 362 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 SAMD15Q9P1V8 674 aa3.68□□□□□ -1.82
SMAD1-203ENST00000502342 TNPO3Q9Y5L0 923 aaKnown RBP3.68□□□□□ -1.82
SMAD1-203ENST00000502342 SLC12A8A0AV02 714 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 B4E1Z4 1266 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 PRRG2O14669 202 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 KCNQ2O43526 872 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 CLASP2O75122 1294 aaKnown RBP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 DNAJC8O75937 253 aaPredicted RBP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 NPTXRO95502 500 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 MMEP08473 750 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 COL6A1P12109 1028 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 SYN1P17600 705 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 GJA4P35212 333 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 FLT3P36888 993 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 ADCY8P40145 1251 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 PABPC4Q13310 644 aaKnown RBP eCLIP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 NOLC1Q14978 699 aaKnown RBP eCLIP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 SKOR2Q2VWA4 1001 aaPredicted RBP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 FNDC3BQ53EP0 1204 aaKnown RBP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 TMEM177Q53S58 311 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 FIGNQ5HY92 759 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 ZFYVE27Q5T4F4 411 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 LRSAM1Q6UWE0 723 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 DPP8Q6V1X1 898 aaPredicted RBP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 GPR155Q7Z3F1 870 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 LIMS2Q7Z4I7 341 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 HOMER1Q86YM7 354 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 LGI4Q8N135 537 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 CXorf38Q8TB03 319 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 CELF4Q9BZC1 486 aaKnown RBP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 PDGFDQ9GZP0 370 aaPredicted RBP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 BARX1Q9HBU1 254 aaPredicted RBP3.67□□□□□ -1.82
SMAD1-203ENST00000502342 JADE2Q9NQC1 790 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 KCND1Q9NSA2 647 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 FANCLQ9NW38 375 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 CDC42EP3Q9UKI2 254 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 PTPN22Q9Y2R2 807 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 CD2APQ9Y5K6 639 aa3.67□□□□□ -1.82
SMAD1-203ENST00000502342 H0Y858 1186 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 B4GALT3O60512 393 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 HIP1RO75146 1068 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 GLRX3O76003 335 aaKnown RBP3.66□□□□□ -1.82
SMAD1-203ENST00000502342 KLHL18O94889 574 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 KNG1P01042 644 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 CELA3BP08861 270 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 JMJD7P0C870 316 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 ZBTB48P10074 688 aaPredicted RBP3.66□□□□□ -1.82
SMAD1-203ENST00000502342 PTGS1P23219 599 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 IGFALSP35858 605 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 TCEA2Q15560 299 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 WDR72Q3MJ13 1102 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 CFAP100Q494V2 611 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 TBC1D10BQ4KMP7 808 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms