RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 ZNF804BA4D1E1 1349 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 USP17L12C9JPN9 530 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 USP17L21D6R901 530 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZBTB43O43298 467 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 KRT16P08779 473 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 FERP16591 822 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZNF18P17022 549 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 SLC8A1P32418 973 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 COPB2P35606 906 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 RASSF7Q02833 373 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 NR1I3Q14994 352 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 DOK7Q18PE1 504 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 SH3D19Q5HYK7 790 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 ODR4Q5SWX8 454 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 SHC4Q6S5L8 630 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 KDM7AQ6ZMT4 941 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 CCDC47Q96A33 483 aaKnown RBP6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 FAM84BQ96KN1 310 aaPredicted RBP6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 TUT1Q9H6E5 874 aaKnown RBP6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 BATF3Q9NR55 127 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 ABCF3Q9NUQ8 709 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 MCM9Q9NXL9 1143 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 MXRA7P84157 204 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 PICALMQ13492 652 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 P3H1Q32P28 736 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 ALS2CLQ60I27 953 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 ADALQ6DHV7 355 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZNF746Q6NUN9 644 aaPredicted RBP6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 CYB5R4Q7L1T6 521 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 HOOK3Q86VS8 718 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 VGLL2Q8N8G2 317 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 NELL1Q92832 810 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 SEZ6LQ9BYH1 1024 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 INTUQ9ULD6 942 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 FAM184BQ9ULE4 1060 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 AKR1B15C9JRZ8 316 aaPredicted RBP6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 GLI1P08151 1106 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 HERVK_113P62684 666 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 UBE4AQ14139 1066 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 BTG3Q14201 252 aaPredicted RBP6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 WTAPQ15007 396 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 UBE3CQ15386 1083 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 SLC27A3Q5K4L6 730 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 MS4A14Q96JA4 679 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 ALG1Q9BT22 464 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 RSPH9Q9H1X1 276 aaPredicted RBP6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 MKNK2Q9HBH9 465 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 AS3MTQ9HBK9 375 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 ZSWIM5Q9P217 1185 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 NFU1Q9UMS0 254 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 STK38LQ9Y2H1 464 aa6.32□□□□□ -1.4
SOX2-OT-218ENST00000498731 TSPY2A6NKD2 308 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 GOLGA8KD6RF30 607 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 NCK2O43639 380 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 GNA14O95837 355 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 PARP1P09874 1014 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 CD44P16070 742 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 CD53P19397 219 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 CCT6AP40227 531 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 IARSP41252 1262 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 USP46P62068 366 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 DBN1Q16643 649 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 UBAP2Q5T6F2 1119 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 EXOC3L1Q86VI1 746 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 SNRNP27Q8WVK2 155 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 RAPGEF5Q92565 580 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 CNKSR1Q969H4 720 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 OSBPL9Q96SU4 736 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 DDX50Q9BQ39 737 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 BEGAINQ9BUH8 593 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 TUBE1Q9UJT0 475 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 PNMA3Q9UL41 463 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 ANGEL1Q9UNK9 670 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 PHF24Q9UPV7 400 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 ARFGEF2Q9Y6D5 1785 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 PNPLA7Q6ZV29 1317 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 PKD1L3Q7Z443 1732 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 ABCA3Q99758 1704 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 GOLGA6L9A6NEM1 432 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 HNRNPRO43390 633 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 ATG7O95352 703 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 LDHBP07195 334 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 CYP2D6P10635 497 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 GM2AP17900 193 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 FGFR2P21802 821 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 DPYDQ12882 1025 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 CUL3Q13618 768 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 IQCKQ8N0W5 287 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 JAKMIP2Q96AA8 810 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 MOV10L1Q9BXT6 1211 aaKnown RBP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 ANKRD2Q9GZV1 360 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 ADAM22Q9P0K1 906 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 TCEAL9Q9UHQ7 104 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 RIC1Q4ADV7 1423 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 NWD2Q9ULI1 1742 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 NKRFO15226 690 aaKnown RBP eCLIP6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 NDUFB5O43674 189 aa6.31□□□□□ -1.4
SOX2-OT-218ENST00000498731 OPA1O60313 960 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms