RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 HERPUD2Q9BSE4 406 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 MCM9Q9NXL9 1143 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 LAMB1P07942 1786 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 CCDC88AQ3V6T2 1871 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 NRAPQ86VF7 1730 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 PDPK1O15530 556 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 CALM1P0DP23 149 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 CALM2P0DP24 149 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 CALM3P0DP25 149 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 NCAM1P13591 858 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 CASP14P31944 242 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 FXR1P51114 621 aaKnown RBP eCLIP9.91□□□□□ -0.82
FN1-227ENST00000498719 SEPT6Q14141 434 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 CT47A1Q5JQC4 288 aaPredicted RBP9.91□□□□□ -0.82
FN1-227ENST00000498719 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 ZCCHC8Q6NZY4 707 aaKnown RBP9.91□□□□□ -0.82
FN1-227ENST00000498719 STRA8Q7Z7C7 330 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 FAM169BQ8N8A8 192 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 PARD3BQ8TEW8 1205 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 DYNLL2Q96FJ2 89 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 CRNKL1Q9BZJ0 848 aaKnown RBP9.91□□□□□ -0.82
FN1-227ENST00000498719 AASDHPPTQ9NRN7 309 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 PRKAG3Q9UGI9 489 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 PFDN2Q9UHV9 154 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 MCM8Q9UJA3 840 aa9.91□□□□□ -0.82
FN1-227ENST00000498719 KIAA1551Q9HCM1 1747 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 COL22A1Q8NFW1 1626 aaPredicted RBP9.9□□□□□ -0.82
FN1-227ENST00000498719 PABPN1LA6NDY0 278 aaKnown RBP9.9□□□□□ -0.82
FN1-227ENST00000498719 RNF225M0QZC1 329 aaPredicted RBP9.9□□□□□ -0.82
FN1-227ENST00000498719 TNFRSF21O75509 655 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 INMTO95050 263 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 GYPCP04921 128 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 PBX1P40424 430 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 PURAQ00577 322 aaKnown RBP9.9□□□□□ -0.82
FN1-227ENST00000498719 IFRD2Q12894 506 aaPredicted RBP9.9□□□□□ -0.82
FN1-227ENST00000498719 ORC1Q13415 861 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 PICALMQ13492 652 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 WDR45BQ5MNZ6 344 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 JAKMIP3Q5VZ66 844 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 RRAGBQ5VZM2 374 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 ZNF771Q7L3S4 317 aaPredicted RBP9.9□□□□□ -0.82
FN1-227ENST00000498719 RASGRP2Q7LDG7 609 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 YIPF4Q9BSR8 244 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 SARGQ9BW04 601 aa9.9□□□□□ -0.82
FN1-227ENST00000498719 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.9□□□□□ -0.82
FN1-227ENST00000498719 SPATA31A5Q5VU36 1347 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 SPATA31A7Q8IWB4 1347 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 PP2D1A8MPX8 630 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 SMAD7O15105 426 aaKnown RBP9.9□□□□□ -0.83
FN1-227ENST00000498719 TFRCP02786 760 aaKnown RBP9.9□□□□□ -0.83
FN1-227ENST00000498719 PNMA6AP0CW24 399 aaPredicted RBP9.9□□□□□ -0.83
FN1-227ENST00000498719 PFKFB3Q16875 520 aaPredicted RBP9.9□□□□□ -0.83
FN1-227ENST00000498719 FAM98CQ17RN3 349 aaKnown RBP9.9□□□□□ -0.83
FN1-227ENST00000498719 GFOD2Q3B7J2 385 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 TEX35Q5T0J7 233 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 RC3H1Q5TC82 1133 aaKnown RBP9.9□□□□□ -0.83
FN1-227ENST00000498719 PPFIBP1Q86W92 1011 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 CCDC12Q8WUD4 166 aaPredicted RBP9.9□□□□□ -0.83
FN1-227ENST00000498719 CCDC34Q96HJ3 373 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 VPS16Q9H269 839 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 CAAP1Q9H8G2 361 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 PLCB1Q9NQ66 1216 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 SH3GLB2Q9NR46 395 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 IL17RBQ9NRM6 502 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 ZNF180Q9UJW8 692 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 FAM50BQ9Y247 325 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 GDAQ9Y2T3 454 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 PCDHB9Q9Y5E1 797 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 MRFAP1Q9Y605 127 aa9.9□□□□□ -0.83
FN1-227ENST00000498719 EFCAB8A8MWE9 144 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 TFAP4Q01664 338 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 PPP2R3AQ06190 1150 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 KRT31Q15323 416 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 TERF2Q15554 542 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 GRIK5Q16478 980 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 SLC35G1Q2M3R5 365 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 FAM26DQ5JW98 314 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 SPATC1Q76KD6 591 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 NBPF5PQ86XG9 351 aaPredicted RBP9.89□□□□□ -0.83
FN1-227ENST00000498719 IQUBQ8NA54 791 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 SLC44A5Q8NCS7 719 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 FBXO41Q8TF61 875 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 NLRP3Q96P20 1036 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 PANX2Q96RD6 677 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 PLIN2Q99541 437 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 NOL10Q9BSC4 688 aaKnown RBP9.89□□□□□ -0.83
FN1-227ENST00000498719 RHOBTB2Q9BYZ6 727 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 OSBPL7Q9BZF2 842 aa9.89□□□□□ -0.83
FN1-227ENST00000498719 ZBTB39O15060 712 aa9.88□□□□□ -0.83
FN1-227ENST00000498719 MFAP3LO75121 409 aa9.88□□□□□ -0.83
FN1-227ENST00000498719 BMP15O95972 392 aa9.88□□□□□ -0.83
FN1-227ENST00000498719 CCDC175P0C221 793 aa9.88□□□□□ -0.83
FN1-227ENST00000498719 CBX2Q14781 532 aaPredicted RBP9.88□□□□□ -0.83
FN1-227ENST00000498719 TUBB8Q3ZCM7 444 aa9.88□□□□□ -0.83
FN1-227ENST00000498719 PNMA8AQ86V59 439 aaPredicted RBP9.88□□□□□ -0.83
FN1-227ENST00000498719 ACRBPQ8NEB7 543 aa9.88□□□□□ -0.83
FN1-227ENST00000498719 MTMR8Q96EF0 704 aa9.88□□□□□ -0.83
FN1-227ENST00000498719 SRRTQ9BXP5 876 aaKnown RBP9.88□□□□□ -0.83
FN1-227ENST00000498719 TRIM8Q9BZR9 551 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms