RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 TEX35Q5T0J7 233 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 GORABQ5T7V8 394 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 WDR93Q6P2C0 686 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 RAD9BQ6WBX8 426 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 C16orf86Q6ZW13 317 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 REC114Q7Z4M0 266 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 DEFB132Q7Z7B7 95 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 CRACR2BQ8N4Y2 399 aaPredicted RBP4.41□□□□□ -1.7
CLTC-209ENST00000498711 CEP112Q8N8E3 955 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 TTLL11Q8NHH1 800 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 GOLGA1Q92805 767 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 SMARCE1Q969G3 411 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 NXPE3Q969Y0 559 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 PLD4Q96BZ4 506 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 AIFM3Q96NN9 605 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 CLIC6Q96NY7 704 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 NSUN5Q96P11 429 aaKnown RBP4.41□□□□□ -1.7
CLTC-209ENST00000498711 VIPAS39Q9H9C1 493 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 MRPL44Q9H9J2 332 aaKnown RBP4.41□□□□□ -1.7
CLTC-209ENST00000498711 SENP2Q9HC62 589 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 RTL9Q8NET4 1388 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 MYH3P11055 1940 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 DCDC2BA2VCK2 349 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 AKR1B15C9JRZ8 316 aaPredicted RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 H3BQF6 201 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 BIN1O00499 593 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 FOXN1O15353 648 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 CILPO75339 1184 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 SEC31AO94979 1220 aaKnown RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 UQCRFS1P1P0C7P4 283 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 MARCKSP29966 332 aaPredicted RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 IARSP41252 1262 aaKnown RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 AARSP49588 968 aaKnown RBP eCLIP4.4□□□□□ -1.7
CLTC-209ENST00000498711 PRR20EP86478 221 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 PRR20CP86479 221 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 PRR20DP86480 221 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 PRR20BP86481 221 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 PRR20AP86496 221 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 AMPD3Q01432 767 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 SSRP1Q08945 709 aaKnown RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 SEC23AQ15436 765 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 PLEKHG6Q3KR16 790 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 MTERF2Q49AM1 385 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 ZNF572Q7Z3I7 529 aaPredicted RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 LSRQ86X29 649 aaPredicted RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 RBBP8NLQ8NC74 664 aaPredicted RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 CNNM3Q8NE01 707 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 GOLGA5Q8TBA6 731 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 ZNF526Q8TF50 670 aaPredicted RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 HHIPQ96QV1 700 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.4□□□□□ -1.7
CLTC-209ENST00000498711 EPB41L4AQ9HCS5 686 aaPredicted RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 DDX56Q9NY93 547 aaKnown RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 FEZ2Q9UHY8 353 aaPredicted RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 HOOK1Q9UJC3 728 aaKnown RBP4.4□□□□□ -1.7
CLTC-209ENST00000498711 DENND2AQ9ULE3 1009 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 SUGT1Q9Y2Z0 365 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 PCDHB5Q9Y5E4 795 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 PCDHGC4Q9Y5F7 938 aa4.4□□□□□ -1.7
CLTC-209ENST00000498711 FIGNL2A6NMB9 653 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 NFKBIEO00221 500 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 PDE2AO00408 941 aaPredicted RBP4.4□□□□□ -1.71
CLTC-209ENST00000498711 ZBTB43O43298 467 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 URI1O94763 535 aaPredicted RBP4.4□□□□□ -1.71
CLTC-209ENST00000498711 BPNT1O95861 308 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 SERPINC1P01008 464 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 A1BGP04217 495 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 OAS2P29728 719 aaKnown RBP4.4□□□□□ -1.71
CLTC-209ENST00000498711 SQSTM1Q13501 440 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 SEPT6Q14141 434 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 PKN1Q16512 942 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 WHAMMP3Q1A5X7 153 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 LONRF2Q1L5Z9 754 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 SLC9C2Q5TAH2 1124 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 TMTC2Q8N394 836 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 THAP3Q8WTV1 239 aaPredicted RBP4.4□□□□□ -1.71
CLTC-209ENST00000498711 DHX58Q96C10 678 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 GSDMAQ96QA5 445 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 PHF20Q9BVI0 1012 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 IRF2BPLQ9H1B7 796 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 CNNM2Q9H8M5 875 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 BRMS1Q9HCU9 246 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 CYP8B1Q9UNU6 501 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 A0A1B0GUL6 1792 aa4.4□□□□□ -1.71
CLTC-209ENST00000498711 GSG1L2A8MUP6 293 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 CPLX1O14810 134 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 PRPF3O43395 683 aaKnown RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 MFAP3LO75121 409 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 DEXIO95424 95 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 BMP15O95972 392 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 PDE6AP16499 860 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 NRLP54845 237 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 ST5P78524 1137 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 GRIN1Q05586 938 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 SPEM2Q0P670 501 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 NPY5RQ15761 445 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 CFAP100Q494V2 611 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 CPLX2Q6PUV4 134 aaKnown RBP4.39□□□□□ -1.71
CLTC-209ENST00000498711 GK5Q6ZS86 529 aa4.39□□□□□ -1.71
CLTC-209ENST00000498711 RALYLQ86SE5 291 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms