RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 PROSER1Q86XN7 944 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 NOSTRINQ8IVI9 506 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 RBM12BQ8IXT5 1001 aaKnown RBP6.85□□□□□ -1.31
SSR3-209ENST00000498205 ZNF526Q8TF50 670 aaPredicted RBP6.85□□□□□ -1.31
SSR3-209ENST00000498205 ARHGAP28Q9P2N2 729 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 B3GALT1Q9Y5Z6 326 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 FAM90A27PA6NNH2 459 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 M0R2C6 588 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 FBXO21O94952 628 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 JMJD7P0C870 316 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 SLURP1P55000 103 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 IRF9Q00978 393 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 PIK3R6Q5UE93 754 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 PRAMEF18Q5VWM3 479 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 GIMAP6Q6P9H5 292 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 ABHD17CQ6PCB6 329 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 TMC5Q6UXY8 1006 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 LRRTM3Q86VH5 581 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 L2HGDHQ9H9P8 463 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 ARHGAP20Q9P2F6 1191 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 B4GALT6Q9UBX8 382 aa6.84□□□□□ -1.31
SSR3-209ENST00000498205 EIF4G1Q04637 1599 aaKnown RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 ARID1BQ8NFD5 2236 aaPredicted RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 PRAMEF25A6NGN4 478 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 BTBD11A6QL63 1104 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 GLRX3O76003 335 aaKnown RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 C4BPAP04003 597 aaKnown RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 ZNF28P17035 718 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 SDSP20132 328 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 PFKPQ01813 784 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 KIAA2012Q0VF49 1180 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 ZNF174Q15697 407 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 SMAD2Q15796 467 aaKnown RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 SKIDA1Q1XH10 827 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 TKFCQ3LXA3 575 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 FBLN7Q53RD9 439 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 DALRD3Q5D0E6 543 aaKnown RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 CDCA2Q69YH5 1023 aaPredicted RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 CC2D1AQ6P1N0 951 aaPredicted RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 SPOCD1Q6ZMY3 1216 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 TP53I13Q8NBR0 393 aaPredicted RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 DDX1Q92499 740 aaKnown RBP6.83□□□□□ -1.32
SSR3-209ENST00000498205 DLG3Q92796 817 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 E2F7Q96AV8 911 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 SCYL1Q96KG9 808 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 KCNC2Q96PR1 638 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 ZCCHC4Q9H5U6 513 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 ACSS2Q9NR19 701 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 ZKSCAN5Q9Y2L8 839 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 ASB1Q9Y576 335 aa6.83□□□□□ -1.32
SSR3-209ENST00000498205 H7C1D1 291 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 CBX4O00257 560 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 SCDO00767 359 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 TRIM13O60858 407 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 CYP17A1P05093 508 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 BMP7P18075 431 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 AOAHP28039 575 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 FNTBP49356 437 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 GJA9P57773 515 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 TM4SF20Q53R12 229 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 PKN3Q6P5Z2 889 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 ADAMTS17Q8TE56 1095 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 PARD6AQ9NPB6 346 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 FTSJ1Q9UET6 329 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 CROTQ9UKG9 612 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 MROH2BQ7Z745 1585 aa6.82□□□□□ -1.32
SSR3-209ENST00000498205 PTPDC1A2A3K4 754 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 FOXP2O15409 715 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 GAS7O60861 476 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 PTGS1P23219 599 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 IL13P35225 146 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 NEK4P51957 841 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 ZNF460Q14592 562 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 VMACQ2NL98 169 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 CXXC5Q7LFL8 322 aaKnown RBP6.81□□□□□ -1.32
SSR3-209ENST00000498205 STK32CQ86UX6 486 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 NME9Q86XW9 330 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 WDR48Q8TAF3 677 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 CALML6Q8TD86 181 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 PCIF1Q9H4Z3 704 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 KCND1Q9NSA2 647 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 ZFP69BQ9UJL9 534 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 FBXO10Q9UK96 956 aa6.81□□□□□ -1.32
SSR3-209ENST00000498205 TOP2AP11388 1531 aaKnown RBP6.81□□□□□ -1.32
SSR3-209ENST00000498205 TRAF5O00463 557 aa6.8□□□□□ -1.32
SSR3-209ENST00000498205 ZBTB48P10074 688 aaPredicted RBP6.8□□□□□ -1.32
SSR3-209ENST00000498205 ZEB1P37275 1124 aaPredicted RBP6.8□□□□□ -1.32
SSR3-209ENST00000498205 OCRLQ01968 901 aa6.8□□□□□ -1.32
SSR3-209ENST00000498205 SART3Q15020 963 aaKnown RBP6.8□□□□□ -1.32
SSR3-209ENST00000498205 CPZQ66K79 652 aa6.8□□□□□ -1.32
SSR3-209ENST00000498205 TRMT10BQ6PF06 316 aaKnown RBP6.8□□□□□ -1.32
SSR3-209ENST00000498205 BORAQ6PGQ7 559 aa6.8□□□□□ -1.32
SSR3-209ENST00000498205 FRMD5Q7Z6J6 570 aa6.8□□□□□ -1.32
SSR3-209ENST00000498205 ZNF761Q86XN6 746 aaPredicted RBP6.8□□□□□ -1.32
SSR3-209ENST00000498205 LCORQ96JN0 433 aaPredicted RBP6.8□□□□□ -1.32
SSR3-209ENST00000498205 ZSWIM3Q96MP5 696 aa6.8□□□□□ -1.32
SSR3-209ENST00000498205 PEG3Q9GZU2 1588 aa6.8□□□□□ -1.32
SSR3-209ENST00000498205 TMEM168Q9H0V1 697 aa6.8□□□□□ -1.32
SSR3-209ENST00000498205 INCENPQ9NQS7 918 aa6.8□□□□□ -1.32
SSR3-209ENST00000498205 USP40Q9NVE5 1235 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms