RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 VAMP1P23763 118 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 SLURP1P55000 103 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 FOXO4P98177 505 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 CALD1Q05682 793 aaKnown RBP6.87□□□□□ -1.31
GGPS1-208ENST00000497327 TARBP2Q15633 366 aaKnown RBP6.87□□□□□ -1.31
GGPS1-208ENST00000497327 ZNF654Q8IZM8 581 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 RASGRP4Q8TDF6 673 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 FNIP1Q8TF40 1166 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 TEPSINQ96N21 525 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 PHAXQ9H814 394 aaKnown RBP6.87□□□□□ -1.31
GGPS1-208ENST00000497327 PRDM11Q9NQV5 511 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 IFT57Q9NWB7 429 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 SUSD2Q9UGT4 822 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 PCDHB10Q9UN67 800 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 EFR3BQ9Y2G0 817 aa6.87□□□□□ -1.31
GGPS1-208ENST00000497327 COL16A1Q07092 1604 aaPredicted RBP6.87□□□□□ -1.31
GGPS1-208ENST00000497327 COL22A1Q8NFW1 1626 aaPredicted RBP6.87□□□□□ -1.31
GGPS1-208ENST00000497327 WDR17Q8IZU2 1322 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 F8W031 263 aaPredicted RBP6.86□□□□□ -1.31
GGPS1-208ENST00000497327 STXBP3O00186 592 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 SCAMP3O14828 347 aaKnown RBP6.86□□□□□ -1.31
GGPS1-208ENST00000497327 PPP1R11O60927 126 aaPredicted RBP6.86□□□□□ -1.31
GGPS1-208ENST00000497327 VAMP4O75379 141 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 CT47B1P0C2W7 299 aaPredicted RBP6.86□□□□□ -1.31
GGPS1-208ENST00000497327 MC3RP41968 323 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 RRP1P56182 461 aaKnown RBP6.86□□□□□ -1.31
GGPS1-208ENST00000497327 EIF6P56537 245 aaKnown RBP6.86□□□□□ -1.31
GGPS1-208ENST00000497327 DLX2Q07687 328 aaPredicted RBP6.86□□□□□ -1.31
GGPS1-208ENST00000497327 DCTN1Q14203 1278 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 GNPTABQ3T906 1256 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 AMOTQ4VCS5 1084 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 ERICH6BQ5W0A0 696 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 EEF1DP3Q658K8 133 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 MCM10Q7L590 875 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 FRMD5Q7Z6J6 570 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 IL17REQ8NFR9 667 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 TSR2Q969E8 191 aaKnown RBP6.86□□□□□ -1.31
GGPS1-208ENST00000497327 RNF38Q9H0F5 515 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 CGGBP1Q9UFW8 167 aaPredicted RBP6.86□□□□□ -1.31
GGPS1-208ENST00000497327 JAG2Q9Y219 1238 aa6.86□□□□□ -1.31
GGPS1-208ENST00000497327 COL5A2P05997 1499 aaPredicted RBP6.85□□□□□ -1.31
GGPS1-208ENST00000497327 CEMIPQ8WUJ3 1361 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 MAP3K5Q99683 1374 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 A0A1B0GTL3 188 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 A0A1W2PQJ5 194 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 EPHX1P07099 455 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 ASGR2P07307 311 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 RARSP54136 660 aaKnown RBP6.85□□□□□ -1.31
GGPS1-208ENST00000497327 GNAI1P63096 354 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 NFKB2Q00653 900 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 EXOSC9Q06265 439 aaKnown RBP6.85□□□□□ -1.31
GGPS1-208ENST00000497327 PLEKHO1Q53GL0 409 aaPredicted RBP6.85□□□□□ -1.31
GGPS1-208ENST00000497327 ADGRG2Q8IZP9 1017 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 NLGN1Q8N2Q7 840 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 ZNF513Q8N8E2 541 aaPredicted RBP6.85□□□□□ -1.31
GGPS1-208ENST00000497327 FGD4Q96M96 766 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 MTA3Q9BTC8 594 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 RXFP1Q9HBX9 757 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 SLC12A7Q9Y666 1083 aa6.85□□□□□ -1.31
GGPS1-208ENST00000497327 ABCA3Q99758 1704 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 FAM208AQ9UK61 1670 aaKnown RBP6.84□□□□□ -1.31
GGPS1-208ENST00000497327 MFAP1P55081 439 aaKnown RBP6.84□□□□□ -1.31
GGPS1-208ENST00000497327 SLC7A5Q01650 507 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 HEATR6Q6AI08 1181 aaKnown RBP6.84□□□□□ -1.31
GGPS1-208ENST00000497327 LIPIQ6XZB0 460 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 SAPCD2Q86UD0 394 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 ARHGEF39Q8N4T4 335 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 GPRASP2Q96D09 838 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 TSPAN17Q96FV3 270 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 SHDQ96IW2 340 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 SPATA32Q96LK8 384 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 CRBNQ96SW2 442 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 GBP3Q9H0R5 595 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 BCAS3Q9H6U6 928 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 BABAM1Q9NWV8 329 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 RWDD3Q9Y3V2 267 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 CCDC9Q9Y3X0 531 aaKnown RBP6.84□□□□□ -1.31
GGPS1-208ENST00000497327 BACE2Q9Y5Z0 518 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 MEGF6O75095 1541 aa6.84□□□□□ -1.31
GGPS1-208ENST00000497327 SH3D21A4FU49 640 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 PRICKLE3O43900 615 aaPredicted RBP6.83□□□□□ -1.32
GGPS1-208ENST00000497327 BCAR3O75815 825 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 CELA3BP08861 270 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 PMLP29590 882 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 KCNC1P48547 511 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 IRX6P78412 446 aaPredicted RBP6.83□□□□□ -1.32
GGPS1-208ENST00000497327 DPY19L1Q2PZI1 675 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 ZNF530Q6P9A1 599 aaPredicted RBP6.83□□□□□ -1.32
GGPS1-208ENST00000497327 B3GNT8Q7Z7M8 397 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 TSPYL6Q8N831 410 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 C8orf58Q8NAV2 365 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 OR6P1Q8NGX9 317 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 RAPGEF4Q8WZA2 1011 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 RTF1Q92541 710 aaKnown RBP6.83□□□□□ -1.32
GGPS1-208ENST00000497327 ZNF428Q96B54 188 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 PMF1-BGLAPU3KQ54 211 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 OVOS2A0A0G2JMS6 1433 aa6.83□□□□□ -1.32
GGPS1-208ENST00000497327 PHLPP1O60346 1717 aa6.82□□□□□ -1.32
GGPS1-208ENST00000497327 C2orf71A6NGG8 1288 aa6.82□□□□□ -1.32
GGPS1-208ENST00000497327 CYP27B1O15528 508 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms