RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 MUTP22033 750 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 EIF4A3P38919 411 aaKnown RBP14.39□□□□□ -0.11
GARNL3-220ENST00000496711 UBXN2AP68543 259 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 CTTNQ14247 550 aaKnown RBP14.39□□□□□ -0.11
GARNL3-220ENST00000496711 TRAPPC11Q7Z392 1133 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 CTAGE6Q86UF2 777 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 CTAGE4Q8IX94 777 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 HSD17B14Q9BPX1 270 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 LSM14BQ9BX40 385 aaKnown RBP14.39□□□□□ -0.11
GARNL3-220ENST00000496711 ZNF341Q9BYN7 854 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 IFIH1Q9BYX4 1025 aaKnown RBP14.39□□□□□ -0.11
GARNL3-220ENST00000496711 WDR11Q9BZH6 1224 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 DEFB129Q9H1M3 183 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 ANO9A1A5B4 782 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 RSPH10B2B2RC85 870 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 PDXKO00764 312 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 USO1O60763 962 aaKnown RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 ICAM1P05362 532 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 RSPH10BP0C881 870 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 MYBP10242 640 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 EPS15P42566 896 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 PTGER2P43116 358 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 SECISBP2LQ93073 1101 aaKnown RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 DYDC2Q96IM9 177 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 PARD6BQ9BYG5 372 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 TAOK3Q9H2K8 898 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 OLFML3Q9NRN5 406 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 TYW1Q9NV66 732 aaKnown RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 CCPG1Q9ULG6 757 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 FHOD1Q9Y613 1164 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 MYH10P35580 1976 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 FRMPD4Q14CM0 1322 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 WDR46O15213 610 aaKnown RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 AKR1B10O60218 316 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 PRPF6O94906 941 aaKnown RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 ATP1A1P05023 1023 aaKnown RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 HSD17B4P51659 736 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 TGFB2P61812 414 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 TNFAIP1Q13829 316 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 RINT1Q6NUQ1 792 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 CC2D1AQ6P1N0 951 aaPredicted RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 FRMD5Q7Z6J6 570 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 TPH2Q8IWU9 490 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 JDP2Q8WYK2 163 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 SYN2Q92777 582 aaPredicted RBP14.38□□□□□ -0.11
GARNL3-220ENST00000496711 ZNF577Q9BSK1 485 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 TEKT3Q9BXF9 490 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 PCDHA13Q9Y5I0 950 aa14.38□□□□□ -0.11
GARNL3-220ENST00000496711 ASTN1O14525 1302 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 ZNF536O15090 1300 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 SSU72P8A0A1W2PR75 194 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 SHTN1A0MZ66 631 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 PHF20L1A8MW92 1017 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 ENC1O14682 589 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 NOL4O94818 638 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 SLITRK3O94933 977 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 FAM13AO94988 1023 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 GCNT3O95395 438 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 TFRCP02786 760 aaKnown RBP14.37□□□□□ -0.11
GARNL3-220ENST00000496711 HOXD13P35453 343 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 RASA3Q14644 834 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 SFMBT2Q5VUG0 894 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 SLC30A10Q6XR72 485 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 MSANTD4Q8NCY6 345 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 PIGOQ8TEQ8 1089 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 LPAR1Q92633 364 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 ANKZF1Q9H8Y5 726 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 NLRC4Q9NPP4 1024 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 SAR1BQ9Y6B6 198 aa14.37□□□□□ -0.11
GARNL3-220ENST00000496711 RPTORQ8N122 1335 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 MACROD2A1Z1Q3 448 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 CCDC151A5D8V7 595 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 EIF3DO15371 548 aaKnown RBP eCLIP14.36□□□□□ -0.11
GARNL3-220ENST00000496711 SLC16A3O15427 465 aaKnown RBP14.36□□□□□ -0.11
GARNL3-220ENST00000496711 ATP8B1O43520 1251 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 SEC31AO94979 1220 aaKnown RBP14.36□□□□□ -0.11
GARNL3-220ENST00000496711 INPP5BP32019 993 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 TNIP1Q15025 636 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 BRD3Q15059 726 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 TDRD12Q587J7 1177 aaKnown RBP14.36□□□□□ -0.11
GARNL3-220ENST00000496711 DALRD3Q5D0E6 543 aaKnown RBP14.36□□□□□ -0.11
GARNL3-220ENST00000496711 HGSNATQ68CP4 663 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 TXLNBQ8N3L3 684 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 UBE2Q2Q8WVN8 375 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 HOOK2Q96ED9 719 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 AGBL1Q96MI9 1066 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 UNC45AQ9H3U1 944 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 HDAC6Q9UBN7 1215 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 ARMCX3Q9UH62 379 aaPredicted RBP14.36□□□□□ -0.11
GARNL3-220ENST00000496711 COL11A1P12107 1806 aaPredicted RBP14.36□□□□□ -0.11
GARNL3-220ENST00000496711 UBE4BO95155 1302 aa14.36□□□□□ -0.11
GARNL3-220ENST00000496711 NR3C1P04150 777 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 ARP10275 920 aa14.35□□□□□ -0.11
GARNL3-220ENST00000496711 RPL13P26373 211 aaKnown RBP14.35□□□□□ -0.11
GARNL3-220ENST00000496711 ZNF280AP59817 542 aaPredicted RBP14.35□□□□□ -0.11
GARNL3-220ENST00000496711 POLR2FP61218 127 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms