RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 SDF4Q9BRK5 362 aa14.79□□□□□ -0.04
FN1-226ENST00000496542 IFIH1Q9BYX4 1025 aaKnown RBP14.79□□□□□ -0.04
FN1-226ENST00000496542 AZI2Q9H6S1 392 aa14.79□□□□□ -0.04
FN1-226ENST00000496542 TNFRSF10AO00220 468 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 UPP2O95045 317 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 CHRNA1P02708 482 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 ARP10275 920 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 ADD1P35611 737 aaKnown RBP14.78□□□□□ -0.04
FN1-226ENST00000496542 ZNF76P36508 570 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 SREBF1P36956 1147 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 AP3B2Q13367 1082 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 CEP55Q53EZ4 464 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 FAM26DQ5JW98 314 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 BLOC1S2Q6QNY1 142 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 TEX2Q8IWB9 1127 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 APBB2Q92870 758 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 KCNB2Q92953 911 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 ZBTB10Q96DT7 871 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 UHRF1Q96T88 793 aaPredicted RBP14.78□□□□□ -0.04
FN1-226ENST00000496542 YME1L1Q96TA2 773 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 PCYT2Q99447 389 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 C17orf80Q9BSJ5 609 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 GLT8D2Q9H1C3 349 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 SUGCTQ9HAC7 445 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 TRPC6Q9Y210 931 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 SNX14Q9Y5W7 946 aa14.78□□□□□ -0.04
FN1-226ENST00000496542 NFASCO94856 1347 aa14.77□□□□□ -0.04
FN1-226ENST00000496542 CCDC196A0A1B0GTZ2 297 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.77□□□□□ -0.05
FN1-226ENST00000496542 MBLAC1A4D2B0 266 aaPredicted RBP14.77□□□□□ -0.05
FN1-226ENST00000496542 SCG2P13521 617 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 HSPA4P34932 840 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 KCNQ1P51787 676 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 ACTR2P61160 394 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 HTRA4P83105 476 aaPredicted RBP14.77□□□□□ -0.05
FN1-226ENST00000496542 ITGB3BPQ13352 177 aaPredicted RBP14.77□□□□□ -0.05
FN1-226ENST00000496542 PFKFB3Q16875 520 aaPredicted RBP14.77□□□□□ -0.05
FN1-226ENST00000496542 AAK1Q2M2I8 961 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 MARCH8Q5T0T0 291 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 JAKMIP3Q5VZ66 844 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 RPAINQ86UA6 219 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 FBXO22Q8NEZ5 403 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 DNAJB3Q8WWF6 145 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 FAM49AQ9H0Q0 323 aaPredicted RBP14.77□□□□□ -0.05
FN1-226ENST00000496542 AGO4Q9HCK5 861 aaKnown RBP14.77□□□□□ -0.05
FN1-226ENST00000496542 NLRC5Q86WI3 1866 aa14.77□□□□□ -0.05
FN1-226ENST00000496542 LOXHD1Q8IVV2 1947 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 RRN3P2A6NIE6 340 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 DDX39AO00148 427 aaKnown RBP14.76□□□□□ -0.05
FN1-226ENST00000496542 MEIS1O00470 390 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 INSRRP14616 1297 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 CLK2P49760 499 aaKnown RBP14.76□□□□□ -0.05
FN1-226ENST00000496542 MGAT3Q09327 533 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 LPIN1Q14693 890 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 PLCB4Q15147 1175 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 SP7Q8TDD2 431 aaPredicted RBP14.76□□□□□ -0.05
FN1-226ENST00000496542 TRAPPC12Q8WVT3 735 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 TOP1MTQ969P6 601 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 NECAB3Q96P71 396 aaPredicted RBP14.76□□□□□ -0.05
FN1-226ENST00000496542 LMCD1Q9NZU5 365 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 COG5Q9UP83 839 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 CDY2AQ9Y6F7 541 aa14.76□□□□□ -0.05
FN1-226ENST00000496542 PPFIA3O75145 1194 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 REC8O95072 547 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 BMP1P13497 986 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 RPS6KB1P23443 525 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 STAT5BP51692 787 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 MRPS6P82932 125 aaKnown RBP14.75□□□□□ -0.05
FN1-226ENST00000496542 PLA2G4DQ86XP0 818 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 PHKBQ93100 1093 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 HLA-CQ95604 372 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 UIMC1Q96RL1 719 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 TTC3P53804 2025 aa14.75□□□□□ -0.05
FN1-226ENST00000496542 MYH9P35579 1960 aaKnown RBP14.74□□□□□ -0.05
FN1-226ENST00000496542 NID2Q14112 1375 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 ESYT2A0FGR8 921 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 FAM86B1E9PN63 330 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 BACH1O14867 736 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 ADAMTS3O15072 1205 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 CCNE2O96020 404 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 FAM86B2P0C5J1 330 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 AKAP17AQ02040 695 aaKnown RBP14.74□□□□□ -0.05
FN1-226ENST00000496542 TMEM62Q0P6H9 643 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 EPC2Q52LR7 807 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 FBXO47Q5MNV8 452 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 TSHZ1Q6ZSZ6 1077 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 NIPA1Q7RTP0 329 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 PLPPR4Q7Z2D5 763 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 REXO1Q8N1G1 1221 aaKnown RBP14.74□□□□□ -0.05
FN1-226ENST00000496542 CCDC12Q8WUD4 166 aaPredicted RBP14.74□□□□□ -0.05
FN1-226ENST00000496542 TNPO1Q92973 898 aaKnown RBP14.74□□□□□ -0.05
FN1-226ENST00000496542 C6orf50Q9HD87 102 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 EVPLQ92817 2033 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 RALGAPA2Q2PPJ7 1873 aa14.74□□□□□ -0.05
FN1-226ENST00000496542 POTEB3A0JP26 581 aa14.73□□□□□ -0.05
FN1-226ENST00000496542 M0QZ92 97 aa14.73□□□□□ -0.05
FN1-226ENST00000496542 PRPF3O43395 683 aaKnown RBP14.73□□□□□ -0.05
FN1-226ENST00000496542 PSMA5P28066 241 aa14.73□□□□□ -0.05
FN1-226ENST00000496542 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
FN1-226ENST00000496542 CD52P31358 61 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms