RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 MYO5AQ9Y4I1 1855 aaKnown RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 DNAJC25-GNG10A0A024R161 153 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 CYP3A7-CYP3A51PA0A087WV96 503 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 H3BRB1 525 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 PPP1R11O60927 126 aaPredicted RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 CD2BP2O95400 341 aaKnown RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 CYP3A7P24462 503 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 PSEN2P49810 448 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 UBE2HP62256 183 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 RESTQ13127 1097 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 PRAMEF19Q5SWL8 479 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 TAF2Q6P1X5 1199 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 U2AF1L4Q8WU68 220 aaKnown RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 TRIB2Q92519 343 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 TUT1Q9H6E5 874 aaKnown RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 ANKEF1Q9NU02 776 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 SCP2P22307 547 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 UBA1P22314 1058 aaKnown RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 ASIC1P78348 528 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 MTERF2Q49AM1 385 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 ZFP91Q96JP5 570 aaPredicted RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 ADPGKQ9BRR6 497 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 TCHPQ9BT92 498 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 SENP6Q9GZR1 1112 aaPredicted RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 C11orf49Q9H6J7 331 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 ATP6V0A4Q9HBG4 840 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 GJD2Q9UKL4 321 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 GINS2Q9Y248 185 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 SRPRBQ9Y5M8 271 aaKnown RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 MSH4O15457 936 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 SGPL1O95470 568 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 ZSCAN20P17040 1043 aaPredicted RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 MARK3P27448 753 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 CYP4A11Q02928 519 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 CCL14Q16627 93 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 POTEDQ86YR6 584 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 ATP11BQ9Y2G3 1177 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 OTOFQ9HC10 1997 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 CTGFP29279 349 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 ATP2C1P98194 919 aaPredicted RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 MFSD10Q14728 455 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 MTFR1Q15390 333 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 LY6KQ17RY6 165 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 FAM43BQ6ZT52 329 aaPredicted RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 PSPC1Q8WXF1 523 aaKnown RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 TRIM6Q9C030 488 aaPredicted RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 UNC93B1Q9H1C4 597 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 C2orf40Q9H1Z8 148 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.6□□□□□ -0.87
U2AF1-212ENST00000496462 KIAA1024Q9UPX6 916 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 COL4A3BPQ9Y5P4 624 aa9.6□□□□□ -0.87
U2AF1-212ENST00000496462 POTEFA5A3E0 1075 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 CCDC169A6NNP5 214 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 DNM1LO00429 736 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 ERLIN2O94905 339 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 GAP43P17677 238 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 EN2P19622 333 aaPredicted RBP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 ADALQ6DHV7 355 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 HS2ST1Q7LGA3 356 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 ZNF579Q8NAF0 562 aaKnown RBP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 TMEM87AQ8NBN3 555 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 SLC5A5Q92911 643 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 DHX58Q96C10 678 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 USP28Q96RU2 1077 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 FTOQ9C0B1 505 aaKnown RBP eCLIP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 PCDHB6Q9Y5E3 794 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 PGK1P00558 417 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 ARP10275 920 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 RAG1P15918 1043 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 LIG1P18858 919 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 FXR2P51116 673 aaKnown RBP eCLIP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 GJA9P57773 515 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 DMP1Q13316 513 aaPredicted RBP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 BMS1Q14692 1282 aaKnown RBP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 PLPPR4Q7Z2D5 763 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 RPUSD2Q8IZ73 545 aaKnown RBP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 SMARCE1Q969G3 411 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 POLR3CQ9BUI4 534 aaPredicted RBP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 GCOM2Q9BZD3 368 aaPredicted RBP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 KCNH3Q9ULD8 1083 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 GOLGA6L6A8MZA4 724 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 DGAT1O75907 488 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 OATP04181 439 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 MYL1P05976 194 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 PHKA2P46019 1235 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 FAM102BQ5T8I3 360 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 ATP8B4Q8TF62 1192 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 KIFAP3Q92845 792 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 UIMC1Q96RL1 719 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 EIF2AK1Q9BQI3 630 aaKnown RBP9.59□□□□□ -0.87
U2AF1-212ENST00000496462 LXNQ9BS40 222 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 NUP62CLQ9H1M0 184 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 TNMDQ9H2S6 317 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 TMEM39AQ9NV64 488 aa9.59□□□□□ -0.87
U2AF1-212ENST00000496462 DDX60LQ5H9U9 1706 aaKnown RBP9.59□□□□□ -0.88
U2AF1-212ENST00000496462 EVI5O60447 810 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 CYP2C9P11712 490 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 CYBAP13498 195 aa9.58□□□□□ -0.88
U2AF1-212ENST00000496462 TAL1P17542 331 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms